Agrobacterium cucumeris: KZ699_04400
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Entry
KZ699_04400 CDS
T09081
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acuc
Agrobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acuc03016
]
KZ699_04400 (rnd)
Enzymes [BR:
acuc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KZ699_04400 (rnd)
Transfer RNA biogenesis [BR:
acuc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KZ699_04400 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
WHO09046
LinkDB
All DBs
Position
1:complement(901788..902948)
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AA seq
386 aa
AA seq
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MIETTAALAEACTELAKSEFITIDTEFLRETTFWPELCLVQMASPTLEVLVDPLAKGLDL
TPLFELMANPAVVKVFHAARQDIEIIYHLGGLIPHPIFDTQVAAMVCGFGDSISYDQLVQ
KIKNVQIDKSSRFTDWSRRPLTEKQLDYALADVTHLRDVYLSLKSQLEREGRSLWLTEEM
DILESRDTYDMHPDDAWLRLKSRLRKPTELAILKFVAAWREREARSRNVPRSRVLKDDAI
FEIAQQQPKDAEALSRLRTIPKGWERSTSGTAIIETVNAALALPKEEMPKAPRHSHAPEG
SGAAVELLKVLLKLTADKHGVAAKVIANSDDLDKIAAEGENATVGALTGWRRELFGDVAL
KLINGEVALRFAGKKVEAVEVAVSGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacgactgccgccctcgccgaagcctgcacggaactggcgaaatcggaattc
atcaccatcgacaccgagttcctgcgggaaacgaccttctggccggagctttgtctcgtg
cagatggcaagcccgacgcttgaagtgctggtcgatccgctcgccaagggtctcgatctc
acgccgcttttcgagctgatggccaatcctgctgtcgtgaaggttttccatgccgcgcgg
caggatatcgaaatcatctaccatctcggcgggctcattccgcacccgatcttcgacacc
caggtcgccgccatggtctgcggtttcggcgattcgatctcctacgaccagctggtgcag
aagatcaagaacgtgcagatcgacaaatcttcgcgcttcaccgactggagccgccgcccg
ctgaccgaaaagcagctggattacgcgctggccgacgtgacccatctgcgcgacgtctat
ctctcgctgaaatcacagctggagcgcgaaggccgctctctgtggctgaccgaagagatg
gacattctggaatcacgtgacacctatgacatgcatcccgacgatgcgtggctgcggctg
aaatcgcgcctgcgcaagccgaccgagctcgccatcctcaaattcgtcgccgcctggcgc
gagcgtgaggcgcgctcgcgcaacgtgccacgttcgcgcgtcctgaaggatgatgcgatc
ttcgaaatcgcccagcagcagccaaaggatgccgaggcgctgtcgcgcctgcgtacaatc
ccgaagggctgggaacgctccacttcgggtaccgccatcatcgaaaccgtaaatgcggcg
ctggcattgccgaaagaggaaatgcccaaggcgccgcgccacagccacgcgccagagggt
tccggtgctgccgtggaactcttgaaggttctgctgaagctgacggccgacaagcacggc
gttgccgccaaggtcatcgccaacagcgacgatctggacaagatcgccgctgaaggtgaa
aacgcgaccgtgggggcactgaccggctggcggcgcgaactcttcggcgatgtggcgctg
aaactcatcaacggcgaagtggcgctgcgttttgccggcaagaaggtcgaggcggttgag
gttgctgtgagcggcgagtaa
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