Agrobacterium cucumeris: KZ699_04895
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Entry
KZ699_04895 CDS
T09081
Symbol
hupB
Name
(GenBank) DNA-binding protein HupB
KO
K03530
DNA-binding protein HU-beta
Organism
acuc
Agrobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acuc03032
]
KZ699_04895 (hupB)
03036 Chromosome and associated proteins [BR:
acuc03036
]
KZ699_04895 (hupB)
03400 DNA repair and recombination proteins [BR:
acuc03400
]
KZ699_04895 (hupB)
DNA replication proteins [BR:
acuc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KZ699_04895 (hupB)
Chromosome and associated proteins [BR:
acuc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KZ699_04895 (hupB)
DNA repair and recombination proteins [BR:
acuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KZ699_04895 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WHO09134
LinkDB
All DBs
Position
1:1002959..1003234
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGLTKADAASAVDAVFETVQNELKSGGDIRLAGFGSFSVSRREASKG
RNPSTGAEVDIPARNVPKFSAGKGLKDAVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgagctcgtctctgctgttgccgaaaaggctggtctcacgaaggcagat
gctgcttccgctgttgatgccgtattcgaaaccgtacagaacgaactgaagagcggtggc
gacatccgcctcgctggcttcggcagcttctccgttagccgccgtgaagcctccaagggt
cgtaacccttccacgggtgctgaagtcgatatcccggctcgcaacgtaccgaagttttcc
gcaggcaagggcctgaaggacgctgttaactcgtaa
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