Agrobacterium cucumeris: KZ699_08970
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Entry
KZ699_08970 CDS
T09081
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
acuc
Agrobacterium cucumeris
Pathway
acuc00470
D-Amino acid metabolism
acuc00550
Peptidoglycan biosynthesis
acuc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KZ699_08970 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KZ699_08970 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
acuc01011
]
KZ699_08970 (murD)
Enzymes [BR:
acuc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KZ699_08970 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
acuc01011
]
Precursor biosynthesis
Amino acid ligase
KZ699_08970 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
MurD-like_N
TrkA_N
KARI_N
UDPG_MGDP_dh_N
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WHO07236
LinkDB
All DBs
Position
1:complement(1837164..1838573)
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AA seq
469 aa
AA seq
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MIPVTSFRGKKVALFGLGGSGLVTARALVAGGAEVVAFDDNPDSVAKAEAEGIVTADLRT
IDWPSFSSFVLAPGVPLTHPKPHWSVDLAKAAGVEVIGDIELFIRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKASGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTI
NPTAGILLNLTPDHLDRHGTMQHYADVKERLVAGSNTAIVGVDDSHSTLIADRIERAGVK
VERISKRNIVSEGLYAEGSRILRAHGGTSSLLVDLDGIQTLRGSHNAQNAAAAIAACLAV
GVSEDEVRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSYERIYWIAGG
LPKAGGITSLSPLFPHIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADAEKD
ATAGNVVMLSPACASFDQYKNFEIRGDSFVAQVAALDGMTMLVHSGKGG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacgtcgttcagaggtaagaaagtcgcccttttcgggcttggcggttca
ggtcttgtcacggccagggcgctggttgccggtggtgcggaagtcgtcgctttcgacgac
aatcccgacagcgttgccaaggctgaggccgagggcatcgtaacggcggaccttcgaacg
atagactggccctcgttttcttccttcgtgctggcgcccggcgtgcctttgacacatcca
aagccgcactggtctgtggaccttgcgaaagcagcgggcgtcgaggtcatcggcgatatc
gagcttttcattcgcgaacgtcgtgcccatgcgccggattgcccgtttatcgcgattacc
ggcaccaacggtaaatccacgacgacggcgctgatcgcccatattctcaaggcttcaggc
cgcgatacgcagctcggcggcaatatcggcacggcggtgctgagcctcgatccgccgaaa
gcgcaacgtttttacgtggtcgaatgctcgtcctaccagatcgatctggcaccgacgatc
aatccgactgccggtatcctgctcaatctgacgccagaccatctcgaccggcatggcacg
atgcagcattatgccgacgtcaaggagcggctggtggcgggcagcaacactgcgatcgtc
ggtgtggatgacagccattcgacgctgattgccgaccgtatcgagcgcgccggcgtcaag
gtggagcgcatttccaagcgcaacatcgtttccgaaggtctttatgccgaaggcagccgc
atcctgcgggcacatggcggcacgtcttcgctgctggtcgatctcgacggtatccagacg
cttcgtggcagccacaatgcgcagaacgcggcggcggcaatcgctgcctgccttgcggtc
ggcgtgtccgaagacgaggttcgcgccggtctcaaatcgttccccggcctcaagcatcgc
atgcagccggtcggccggcgcggtaacgtcaccttcgtcaatgacagcaaggcgaccaat
gccgatgccgcggcacctgcgctttcaagctatgagcggatttactggatcgccggcggt
ctgcccaaggcgggtggcatcaccagcctgtcgccgctgtttcctcacatcgccaaagcc
tatctgatcggtgaagcggcggcagaatttgccgcgacgcttggcgaggcggtgccttat
gaaatatccggcacgctggacaaggccgtgcagcacgcggcagccgatgcggaaaaagat
gcgacggccggcaacgtcgtgatgttatccccggcttgcgcaagcttcgatcaatataag
aactttgaaatcagaggtgattcgttcgtcgcacaggtcgcggcgctcgacggcatgacg
atgctcgttcactctggaaaagggggctga
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