Agrobacterium cucumeris: KZ699_12095
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Entry
KZ699_12095 CDS
T09081
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
acuc
Agrobacterium cucumeris
Pathway
acuc00300
Lysine biosynthesis
acuc00470
D-Amino acid metabolism
acuc01100
Metabolic pathways
acuc01110
Biosynthesis of secondary metabolites
acuc01120
Microbial metabolism in diverse environments
acuc01230
Biosynthesis of amino acids
Module
acuc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KZ699_12095 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KZ699_12095 (dapF)
Enzymes [BR:
acuc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KZ699_12095 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WHO07816
UniProt:
A0ABY8RK09
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All DBs
Position
1:complement(2512170..2513072)
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AA seq
300 aa
AA seq
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MADTVEFAKMNGLGNKILVIDMRGRKDMVTPAAAIALNADPATQFDQIMAIHDPRVSGTD
AFIDILNCDGTKAQACGNGTRCVVQALSSETGKTSFTFQTVAGILNAVEHEDGMISVDMG
LPRFRWSDIPLSEEFHDTSRIELQIGPIDAPILHSPAVMSMGNPHAIFWVDRDPMDFDLE
RFGPLLENHPIFPEKANITLAQVMSDSALRTRTWERGAGLTLACGSAACAAAVSAARTGR
TAKRVTIDVASSPIRVPLTIDWREDNHVIMTGPAEWEWSGSVDPVTGVWSRDAVAEQGAV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacggtcgaatttgcgaagatgaacgggcttggcaacaagatcctcgttatc
gacatgcgcggccgcaaggatatggtcacgcctgcggcagccattgcgctcaatgccgat
cccgcgacccagttcgaccagatcatggccattcacgatccgcgtgtcagtggcacggat
gcctttatcgacattctcaattgcgatggcacgaaggcgcaggcctgcggcaacggcacg
cgctgcgtggtgcaggcactgtcttccgaaaccggcaagaccagcttcacgttccagacg
gtggccggcattttgaatgccgtcgagcatgaagacggcatgatatcagtcgatatgggt
ctgccgcgtttccgctggagcgatattccgctgtcggaagagttccatgatacgagccgc
atcgaattgcagatcgggccgatcgatgcgccgatcctgcactcgcctgccgtcatgtcg
atgggcaacccgcatgcaattttctgggtggaccgcgatccgatggatttcgatcttgag
cggttcgggccgctgctcgaaaaccatccaatatttccggaaaaggccaatatcacactc
gcacaggtgatgtccgacagtgcactgcgcacccgcacctgggagcgtggcgccgggttg
acgcttgcctgcggttccgccgcatgcgctgccgccgtttccgccgcccgcaccggccgc
acggctaagagggtcaccatcgatgtggcctccagccccatccgcgtgccgctgaccatt
gactggcgtgaggacaaccacgtcatcatgaccggcccggctgaatgggaatggtcgggt
tccgtcgatcctgtcacgggtgtctggtcacgggatgcggtggccgagcagggggccgta
tga
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