Agrobacterium cucumeris: KZ699_13065
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Entry
KZ699_13065 CDS
T09081
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acuc
Agrobacterium cucumeris
Pathway
acuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KZ699_13065 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acuc03019
]
KZ699_13065 (recQ)
03400 DNA repair and recombination proteins [BR:
acuc03400
]
KZ699_13065 (recQ)
Enzymes [BR:
acuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KZ699_13065 (recQ)
Messenger RNA biogenesis [BR:
acuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KZ699_13065 (recQ)
DNA repair and recombination proteins [BR:
acuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KZ699_13065 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WHO07990
LinkDB
All DBs
Position
1:2736165..2737973
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AA seq
602 aa
AA seq
DB search
MTAEPLQILKTIYGYDTFRRRQGEIIQHVMAGHNAFVLMPTGGGKSLCYQIPALARAGMG
LIVSPLIALMVDQVAALRQAGVRAEALNSDLSLEERRALWQDMRAGEVDILYAAPETLLK
PDVLDALQSIDLSLIAVDEAHCLSQWGHDFRPPYRQLDTLIERFPDTPRMALTATADEPT
RAEILGHLGIDDKDAFIAGFDRPNIRYAIMEKDNPRAQLKRFLNGRENESGIVYCLSKRK
VDETAAWLREEGRDALPYHAGMDKAAREENQTRFQHGEAVIIVATVAFGMGIDKPDVRFV
VHIDLPGSIEAYYQETGRAGRDGLPSDVLMLYGYEDIALRNRFIEESDAADQRKHMERQK
LDSLLGLAETAGCRRQILLSYFGDRCEPCGNCDTCAEPPDLFDGSIAAQKLLSCIYRTGE
RFGQAYVIRVLLGVEDERISRFGHDQITTYGIGKEHDNRTWRAILRQLVALRLIEVDLSG
HGGLSISEDGRRFLREKPSLMLRIPSAPRSTRQQTPRNAASTALPEADRGLFEVLRAKRM
EIARTQNVPPYVIFHDKTLIELAAAKPASAREMAQIPGVGDTKLERYGPAFLEAIMQHAA
GE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgaacctttgcagatactcaagaccatctacggctatgatacattccgccga
cgccagggcgagatcatccagcatgtcatggcaggacataatgcattcgtactcatgccc
acgggtggaggaaagtcgctttgttaccagatcccggcgcttgcccgggcgggaatgggg
cttatcgtatcgccgctcatagcgttgatggtcgatcaggtggctgccctgcgtcaggct
ggtgtgcgggccgaggcgctcaattccgatctttctctggaagagcgccgtgcgctctgg
caggatatgcgggccggcgaggtcgatattctttatgccgcgccggaaaccctgctcaaa
cccgatgttctcgacgcgcttcaatccattgacctgtcgttgatcgcggtcgatgaggcg
cattgcctgtcgcaatggggacatgatttccgcccgccttatcgtcagctcgacacattg
attgagcgttttcccgacacgccgcgcatggccctgacggcgacggcggatgaacccacc
cgcgccgagattctcggccatctgggcatcgatgacaaagatgcattcatcgccgggttc
gaccgtcctaacatccgctatgcgatcatggagaaggacaatcctcgcgcccagctgaaa
cgttttctcaacggccgggaaaatgaaagcggaatcgtttattgcctgtcaaaacgcaag
gtggatgagacggcggcgtggttgcgggaagaggggcgagatgcgctgccctatcacgcc
ggcatggacaaggccgcccgcgaagagaaccagacccgttttcaacatggtgaggcggtg
attattgtcgcgaccgtcgctttcggcatgggcatcgataagccggatgtgcgtttcgtt
gtccatatcgatttgcccggcagcatcgaggcctattatcaggagaccggccgcgccggt
cgtgatggtctgccgtcagacgtgcttatgctctacggttatgaagacatcgctttgcgc
aaccgcttcattgaagaatcggacgccgcggaccagcgcaaacatatggagcgccagaag
cttgattccctgctcggtctggcggaaacggcgggctgccgccggcagatcctgctctcc
tattttggcgatcgatgcgagccctgtggtaattgtgatacctgcgccgagccgccggat
ctgtttgacgggtcgatagccgcgcaaaagctgctctcctgcatttaccgcactggggaa
cgtttcggccaggcctatgtcatccgcgtcttgctaggcgtcgaggacgagcggatttcc
cgcttcgggcacgatcagatcaccacttacgggatcggcaaagagcatgataatcgcacc
tggcgcgcgattttacggcaactggttgcgcttcgcctgatcgaggtggatctgtccgga
catggcggattgtcgatttccgaagacgggaggcggttcctgcgcgaaaagccatccctg
atgctgagaataccgtctgcgccccgctcgacccgacagcagacgccgcgtaatgccgca
tcgacagctttgccggaggcggatcgtggtctcttcgaggtgttgcgcgcgaagcgcatg
gaaattgcccgcacgcagaacgtcccgccttatgtgatttttcacgacaagaccctgatc
gaactcgctgctgcgaaaccggcctcggcgagggagatggcgcaaatccccggcgtcgga
gacaccaagctggagcgctacggccccgcctttctggaggcgatcatgcagcacgccgct
ggcgagtga
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