Agrobacterium cucumeris: KZ699_13165
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Entry
KZ699_13165 CDS
T09081
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acuc
Agrobacterium cucumeris
Pathway
acuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KZ699_13165 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acuc03019
]
KZ699_13165 (pnp)
03016 Transfer RNA biogenesis [BR:
acuc03016
]
KZ699_13165 (pnp)
Enzymes [BR:
acuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KZ699_13165 (pnp)
Messenger RNA biogenesis [BR:
acuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KZ699_13165 (pnp)
Transfer RNA biogenesis [BR:
acuc03016
]
Prokaryotic type
tRNA degradation factors
KZ699_13165 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WHO08009
LinkDB
All DBs
Position
1:complement(2757538..2759685)
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AA seq
715 aa
AA seq
DB search
MFNKHSVEIEWAGRPLKLETGKVARQADGAVIATYGETMVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDILSMVATSAALTLSGIPFMGPIGGARVGYINGEYVLNPHLDEMEESTLDLVVA
GTSDAVLMVESEAKELNEEIMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPREFEPEDFSA
LENEMLALAETELRTAYKITEKAARYAAVDAVKAKVKAHFLPEEGEAKYSPEEIGAVFKH
LQAKIVRWNVLDTKSRIDGRDLSTVRPIISEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKIALEQAQGGRKHILGEMAN
AITESRSQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEVGAIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGQEVAADKKKEDGEAAAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcactccgtggaaatcgaatgggcaggccgcccgctgaagctcgagacc
ggcaaggttgcccgtcaggctgacggcgccgtcatcgcaacctacggcgagacgatggtt
ctcgcgaccgtggtttccgcaaagtctccgaagcccggccaggacttcttcccgctgacc
gtcaactaccaggaaaagacctatgcagccggcaagattcccggcggttatttcaagcgc
gaaggccgtccgagcgaaaacgaaaccctcgtttcgcgtctgatcgaccgcccgatccgc
ccgcttttccctgaaggttacaagaacgacacgcaggttgtcgtgaccgtcatccagcac
gatctggaaaacaaccccgacattctgtcgatggtcgccacttcggctgcgctgaccctt
tccggcatcccgttcatgggtccgatcggcggcgcgcgcgttggctacatcaacggcgaa
tatgttctgaacccgcatctggacgagatggaagaatccacgcttgatctggttgttgcc
ggcacctccgacgccgttctgatggttgaatcggaagccaaggaactcaacgaagagatc
atgctcggcgccgtcatgttcggccacaagggcttccagccggttatcgacgcgatcatc
aagcttgccgaagttgccgccaaggaaccccgcgaattcgaaccggaagatttctccgcg
ctcgaaaacgaaatgctggctctggccgaaaccgaactgcgcaccgcctacaagatcacc
gaaaaggctgcccgctacgctgccgtcgatgccgtgaaggcgaaggtcaaggcccacttc
ctgccggaagaaggcgaagccaagtacagcccggaagaaatcggcgccgtcttcaagcac
ctgcaggcgaagatcgttcgctggaacgttctcgacaccaagagccgcatcgacggccgc
gacctgtcgaccgttcgtccgatcatttcggaagtcggcctgctgccgcgcacgcacggt
tcggcgctgttcacccgcggtgaaacccaggcgatcgttgttgcgacgctcggcaccggc
gaagacgaacagtatgtcgactcgctcaccggcatgtacaaagaacgcttcctgctgcat
tacaacttcccgccctactcggtcggtgaaacaggccgcatgggctccccgggccgtcgc
gaaatcggtcacggcaagctcgcatggcgcgcgatccgtccgatgctgccgactgcggaa
cagttcccctacacgctgcgcgtcgtttccgaaatcaccgagtccaacggctcttcgtcg
atggcaacggtttgcggcacctcgcttgcactgatggatgccggcgttccgctggcaaag
ccggttgccggtatcgccatgggccttatccttgaaggcgagcgctttgcggttctctcc
gacatcctcggcgacgaagaccacctcggcgacatggacttcaaggttgcgggtacggcc
gacggcatcacctcgctgcagatggacatcaagatcgccggtatcaccgaagagatcatg
aaaatcgctctggagcaggcacagggtggccgcaagcacattctcggcgaaatggccaac
gccatcaccgagagccgcagccagctcggcgaattcgcaccgcgcatcgaagtcatgaac
attccggtcgacaagatccgtgaagtcatcggctccggcggcaaggtcattcgcgaaatc
gttgaaaagaccggcgccaagatcaacatcgaagacgacggcaccgtcaagatcgcttct
tcttccggcaaggaaatcgaagcggcccgcaagtggatccactcgatcgttgctgaaccg
gaagtcggcgccatctacgaaggcacggtcgtaaagaccgctgacttcggcgctttcgtc
aacttcttcggcgcccgcgacggcctcgtccacatctcgcagctcgcttccgagcgtgtg
gccaagacctccgacgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggcttc
gacgagcgtggcaaggttcgcctgtccatgaaggttgtcgaccaggcaaccggccaggaa
gttgctgccgacaagaagaaggaagacggcgaagccgctgccgaataa
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integrated database retrieval system
