Agrobacterium cucumeris: KZ699_13295
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Entry
KZ699_13295 CDS
T09081
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acuc
Agrobacterium cucumeris
Pathway
acuc03030
DNA replication
acuc03410
Base excision repair
acuc03420
Nucleotide excision repair
acuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KZ699_13295 (polA)
03410 Base excision repair
KZ699_13295 (polA)
03420 Nucleotide excision repair
KZ699_13295 (polA)
03440 Homologous recombination
KZ699_13295 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acuc03032
]
KZ699_13295 (polA)
03400 DNA repair and recombination proteins [BR:
acuc03400
]
KZ699_13295 (polA)
Enzymes [BR:
acuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KZ699_13295 (polA)
DNA replication proteins [BR:
acuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KZ699_13295 (polA)
DNA repair and recombination proteins [BR:
acuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KZ699_13295 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KZ699_13295 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
WHO08033
UniProt:
A0ABY8RKB1
LinkDB
All DBs
Position
1:2786191..2789190
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDLYKANRSAPPEDLVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGIPDVFEKWGVGPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANA
DLARLSRQLVALRTDVPLEQSLEALVLEPQNGPKLIAFLKAMEFTTLTRRVAEATDSDAS
AIDPANVPVQWGADAHGPDLDAPASAVAIGDVAAGATAASASPSVSARKLTGEGSAPADL
AAARQVLFSAAKIDTTAYTTIRDLAELDRWIAAARETGVVAFDTETTSLDPMQAELVGFS
LAIADNGKDASGTDIRAAYVPLTHKTGSGGDLFSDGIKLAEGQVPFAEALARLKSLLEDP
AVLKIAQNLKYDYLLMKRHGVVMQSFDDTMLISYVLEAGKATHGMDSLSERWLGHTPIAY
KDVAGSGKSSVTFDFVDIDKATAYAGEDADVTLRLWMALKPRLAAERLTSVYERLERPLV
PVLAHMEERGITVDRQILSRLSGELAQKAAAFEEEIYELAGERFNVGSPKQLGDILFGKM
GLPGGSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPGYIHPETK
RVHTSYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHRLLSADYSQIELRV
LAHVADIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGL
ANQLSIARSEAGEYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSNP
SVKAFNERAAINAPIQGSAADIIRRAMVRIEPALEAEKLSARMLLQVHDELIFEVEEAEI
EKTLPVVVSVMENAAMPAISMKVPLQVDARAAENWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgttgacggttccggtttcattttccgggcgttc
catgccattccgccgctgaaccgcaagtcggacgggctgccggtcaacgccgtctccggc
ttctgcaacatgttgtggaagctcttgaaggatgcgcgcaacaccgatgtcggcgtgacg
ccaacacacttcgccgttattttcgactattcgtcgaaaaccttccgcaatgaactttat
gatctctacaaagccaaccgttccgcgccgcctgaagatctggttccgcaattcggcctg
atccgcgaggcgacacgcgccttcaaccttccctgcatcgagaccgaaggcttcgaggcg
gatgacatcatcgccacctatgcccgccaggcggaggcgatcggcgccgatgtcacgatc
atctcttccgacaaggatctgatgcagctcgtcacggccaatgtgcatatgtacgatgcc
atgaaggacaagcagatcggcatccctgacgtcttcgaaaaatggggcgttggcccggaa
aagatgatcgacctgcaggcgatgaccggcgattccaccgacaatgtgcccggcattccc
ggcatcgggccgaagacggcggcgcaattgctggaggaatatggcgatctcgatacgctg
ctggcgcgggcgggcgaaatcaagcagcagaagcgccgggaaaacatcattgccaacgcc
gatcttgcccgtctttccaggcagctcgtggcacttagaaccgatgtgccgctggagcag
tctctcgaggcgctggtgcttgaaccgcagaacggcccgaagctcatcgccttcctgaag
gcgatggaattcacgacgctgacccgccgcgttgccgaagcgaccgacagcgacgcctct
gccatcgaccccgccaatgtgccggttcagtggggggcggatgcccatggtcccgatctc
gatgcgcctgcttcggcagtcgccattggtgacgtggccgccggcgcaactgccgcctcg
gcttcgccctctgtttcggcgagaaagctgaccggagaaggcagcgcgcctgccgatctc
gccgccgcgcgccaagtgcttttttcagccgccaagatcgatacgaccgcttacacgacg
atcagagaccttgcagaactggaccgctggattgctgcagcccgtgagaccggcgtcgtc
gccttcgacacggaaacgacttcgcttgatccgatgcaggcggaacttgtcggtttttcg
ctggccatcgccgacaatggcaaggacgcctcgggcaccgacatccgcgctgcctatgtt
cctttgacgcacaagaccggctccggcggcgatcttttcagcgatggtatcaagcttgcc
gaagggcaggtgccatttgccgaggcgctggcgcgtttgaaaagcctgcttgaggacccg
gcggttctgaaaatcgcccagaacctcaaatatgactatctgctgatgaaacgccatggc
gtcgtgatgcagagctttgacgataccatgctgatttcttatgttctcgaggctggcaag
gccacgcatggcatggattcgctgtccgaacgctggctcggccacacgccgattgcctac
aaggatgtagcgggatcgggcaagtcgagcgtcaccttcgatttcgtcgacatcgacaag
gcgacggcttacgccggggaagacgcggatgtcaccctgcgcctctggatggccctgaaa
ccccggctcgccgccgagcggctgaccagtgtttacgagcggctggagcgccctctggtg
ccggttctggcgcatatggaggaacgcggcatcaccgttgaccggcagatcctgtcgcgc
ctttccggtgaactggcgcagaaggctgccgccttcgaagaggaaatctacgagctggcg
ggcgagcgtttcaacgtcggatcaccaaagcagctcggcgatattctgttcggcaagatg
ggcttgcccggcggctccaagaccaagaccggccaatggtcgacatcggcgcaggttctg
gaagatctggcagcggaaggtgcagagctgccacgcaagatcgttgactggcggcagctg
acgaagctgaaatcgacctatacggatgcgctgccgggatacatccatcccgagacgaaa
cgggtgcatacctcctacgcgctcgcttccaccaccacggggcgtctgtcgtcctcggag
ccgaaccttcagaatatcccggtgcgcacggcggagggtcgcaagattcgcacggccttc
atctccacgcccggtcacaggcttctgtccgctgactatagccagatcgagctgcgcgtg
ctggctcacgtcgccgatattccgcaactgcgcaacgcctttgaaaacggcatcgacatc
catgcaatgaccgcatcggaaatgtttggcgtgccggtggaaggcatgccgtcggaagtg
cgccgccgcgccaaggccatcaatttcggcatcatctacggtatttcggctttcggtctc
gccaaccagctgagcatcgctcgctcggaggcgggcgaatatatcaagaaatatttcgag
cggtttcccggcattcgcgattacatggaagcgaccaaggctttcgcccgcgaaaacggc
tatgtcgaaacgattttcggccgccgggcgcattatccggaaatccgctcttccaaccct
tcggtgaaagccttcaacgaacgggcggccatcaatgccccgatccagggttctgccgcc
gatatcattcgccgcgcgatggtccgtatagagccggcactggaagcggagaagctctct
gcccgcatgcttttgcaggtgcatgacgaactcatcttcgaagtcgaagaagcggaaatc
gaaaagacgctgcccgtcgtcgtctcggtcatggaaaacgcggccatgccggccatttcc
atgaaggtgccgttgcaggtggatgcgcgtgctgcggagaattgggacgaggcgcattga
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