Agrobacterium cucumeris: KZ699_14325
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Entry
KZ699_14325 CDS
T09081
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acuc
Agrobacterium cucumeris
Pathway
acuc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KZ699_14325 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acuc03400
]
KZ699_14325 (mutM)
Enzymes [BR:
acuc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KZ699_14325 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KZ699_14325 (mutM)
DNA repair and recombination proteins [BR:
acuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KZ699_14325 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF3108
Motif
Other DBs
NCBI-ProteinID:
WHO08225
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All DBs
Position
1:2989997..2990893
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AA seq
298 aa
AA seq
DB search
MPELPEVETVRRGLAPAMEGARVRKLHLGRADLRFPFPEDFATLIEGKTIISLGRRAKYL
LIELEDGLTIIAHLGMSGSFRIEADADEAGNTPGTFHYARSKDGKHDHVVFHLDKGEERV
CVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKGTLL
DQKVIAGLGNIYVCEALWRAHLSPLRAAGTLVTTSGKPKAQLTDLTEKIRDVIADAIAAG
GSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccagaagtcgaaactgtcagacgcggtcttgcccccgccatggaaggg
gcaagggttcgcaaactccaccttggccgcgccgatctgcgttttccgttcccggaggat
ttcgcgacgctgatcgaaggcaaaacgatcatatcgcttggacgccgggcgaaatatctt
ttgatcgaactggaggatgggctgacgatcattgcccatctcggcatgtccggctcgttt
cgtatcgaggcggacgcggatgaagccggcaatacgcccggcacgtttcattatgcccgc
tcaaaggatggcaaacacgaccatgtcgtctttcatctggataagggcgaagagcgcgtc
tgcgtcatctataatgatccgcgccgcttcggcttcatgcatctggtggagcgcaacaag
ctcgatctctatccggcttttgccgagcttgggccggaaccaacaggcaatgcattgagc
gccgattatctggcgagccggtttgagggcaagagccagcccttgaaaggcacgctgctg
gatcagaaggtcattgccggccttggcaatatctatgtctgcgaggcgctgtggcgcgcg
catctttctcccttgcgggcagcgggaacgctggtgacgacatcaggcaagcccaaagcg
cagctcaccgatctgacggaaaaaatccgtgacgtgatcgcggacgctatcgccgccggc
ggctcctcactccgcgaccatatacagacagacgggacactcggttatttccagcattcc
ttttcggtctacgatcaggaaggccagccttgccggacacccggctgcgggggtacggtt
gagagagtggtacaggccggtcgttcgaccttttattgcgccgcctgccagaagtga
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