Agrobacterium cucumeris: KZ699_20520
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Entry
KZ699_20520 CDS
T09081
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acuc
Agrobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acuc03032
]
KZ699_20520
03400 DNA repair and recombination proteins [BR:
acuc03400
]
KZ699_20520
Enzymes [BR:
acuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KZ699_20520
DNA replication proteins [BR:
acuc03032
]
Prokaryotic type
DNA Topoisomerases
KZ699_20520
DNA repair and recombination proteins [BR:
acuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KZ699_20520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WHO10867
LinkDB
All DBs
Position
2:complement(1390618..1391634)
Genome browser
AA seq
338 aa
AA seq
DB search
MPQPPTRLLAKIGLAYVNDQEPGIARERRGRGFCYRLPGGELLSDGIELKRIKSLGVPPA
YRDVWICIDPSGHLQATGFDARGRKQYRYHPDWHALRGETKFFQLKSFGKALPAIRRRAM
ADIGKQDHGEEMTLAALTLLLDAAYLRVGNRSYLETNGTYGATTLLKRHVSFGETIELRF
AAKGGQKVKRQLRHPRLQKILEEIADLPGKELFVWQDSENRVHSVDSSDLNAYLSRTGGA
GISAKTFRTWGGTLAAFCDAMEHVAAGEKPSIKGMCQAAATELSNTPAICRKSYVHPAVL
EIATEEKAQKKLGRILKVGAKPVSGLRADERRLLAFLP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaccgcccacccgccttcttgccaaaatcggacttgcctatgtcaacgatcag
gaaccggggatagcccgcgaaaggcgcgggcgcggtttctgctaccggctgccgggcggt
gaacttctctccgacggcatcgaactgaagcgcatcaaatcgctcggtgtgccgccagcc
taccgggacgtgtggatatgcattgatccatcaggacatttacaggccaccggctttgat
gcgcgtgggcgaaaacaatatcggtatcatcccgactggcatgcgctgcgtggcgagacg
aaattcttccagctcaagagtttcggcaaggcgttgcccgccattcgtcgccgcgcaatg
gccgatattggcaagcaggaccatggggaggaaatgacgctggcagcgctcaccctcctt
cttgacgccgcctatctgcgcgtcggcaaccgctcctatctcgaaaccaacggcacctat
ggcgcgacgaccctgctcaaacggcacgtctccttcggtgaaaccatcgaattgcgcttc
gccgccaagggcgggcaaaaagtgaaacggcaactgcgccacccccgccttcagaaaatc
ctcgaggaaatcgccgatttgcccggcaaggaactcttcgtctggcaggatagcgaaaac
cgggtgcattcggtcgattccagcgatctcaacgcttacctttcccgcaccggcggagcc
ggtatttccgccaagaccttccgcacctggggcggtacgcttgcggccttctgcgatgcg
atggagcacgtggcggcaggggaaaaaccaagcataaagggcatgtgtcaggcggcagcg
actgagctttccaatactcccgccatctgccgcaaaagttacgtgcaccctgccgtgctc
gaaattgcgacggaggaaaaggcacagaaaaagcttggccgcattttgaaagtcggggca
aagcccgtctctggcctcagggcggatgaaagacggctgcttgccttcctgccgtga
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