Agrobacterium cucumeris: KZ699_22950
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Entry
KZ699_22950 CDS
T09081
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
acuc
Agrobacterium cucumeris
Pathway
acuc00541
Biosynthesis of various nucleotide sugars
acuc01100
Metabolic pathways
acuc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KZ699_22950 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
acuc01005
]
KZ699_22950 (rfaD)
Enzymes [BR:
acuc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KZ699_22950 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
acuc01005
]
Core region
KZ699_22950 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
WHO11323
LinkDB
All DBs
Position
2:1944767..1945753
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AA seq
328 aa
AA seq
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MYIVTGAAGFIGSNIVADLEAAGLGPVAVVDWFGRGDKWRNLAKRNIAAYVAPEGLLDYL
RGLKVDVKAVIHMGAISATTEADVDRLIDLNINYSVMLWDWCAEHGVPFIYASSAATYGG
IEDGFDDDETSAGRAALAPLNAYGWSKKTTDDIFVERVARGEKAPPQWVGLKFFNVYGPN
EYHKDDMRSVACKLFDVVQTTNEVSLFKSYRPDIAHGEQRRDFVYVKDCTSFILWLLHNG
NRSGIFNCGSGKARSFADIAHVMGDILGKKLNINFIEMPEAIRGKYQYFTEANMSKVASI
GYNGPQSSLEEGLDDYINSYLRHEDRYR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtacattgttaccggagctgccggatttatcgggtcaaacattgtcgctgatttggaa
gctgcgggtctagggcccgttgctgtggttgactggttcggccgcggtgacaagtggcgc
aacctcgcgaagcggaatattgccgcttacgtcgcccctgagggacttttggactatctt
cgtggcctcaaggtggacgtgaaggcggttattcacatgggtgcgatttcggccaccacg
gaggctgacgtcgaccggttgatcgacttaaacattaattattcggttatgttgtgggat
tggtgcgcagagcatggcgtcccgttcatctatgcgtcttccgctgcgacttacggtgga
atcgaagatggctttgatgacgacgagacgtctgcagggcgagcagctctcgccccgcta
aacgcctatggctggagcaagaagacgaccgatgatatttttgttgaacgtgtagcgcga
ggcgagaaggcgcccccccaatgggttggcctcaaattcttcaatgtttatgggcctaac
gaatatcacaaggacgacatgcgcagcgtagcctgcaagctctttgatgtcgtgcagaca
acaaatgaggtctctctgttcaagtcctatcggcctgatattgcccatggagaacagcgt
cgtgactttgtttacgttaaagactgcacgtcgttcattctttggcttttgcacaatgga
aaccggagtggaatattcaactgcgggtccggtaaagcaaggtcattcgccgatatcgcc
cacgtcatgggcgatattctcggcaagaaactgaatataaacttcattgaaatgcctgag
gctatccggggtaaatatcagtattttacggaagcaaatatgtcgaaggtggcgtcgatc
ggctataatggtccgcaatcatccttggaagaagggcttgatgactatattaactcttat
ctacggcatgaagacaggtatcgctaa
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