Agrobacterium cucumeris: KZ699_22980
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Entry
KZ699_22980 CDS
T09081
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acuc
Agrobacterium cucumeris
Pathway
acuc03420
Nucleotide excision repair
acuc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KZ699_22980
03430 Mismatch repair
KZ699_22980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acuc03400
]
KZ699_22980
Enzymes [BR:
acuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KZ699_22980
DNA repair and recombination proteins [BR:
acuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KZ699_22980
MMR (mismatch excision repair)
Other MMR factors
KZ699_22980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
HHH_5
AAA_12
HHH
ResIII
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WHO11329
LinkDB
All DBs
Position
2:complement(1953014..1955080)
Genome browser
AA seq
688 aa
AA seq
DB search
MAAAYLDKLNEQQRKAVEHGVGLAEGQTAGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAASEMSRRVERICKHVLGSNSGALTDALAWSGTFHGIGARLLRIYAEQI
GLNIDFTIHDREDSADLMNLARHELGFSKTESRFPTKGTCLAIYSRAVNSQTPLKEILRQ
HYPWVASWESELKQLFAAYVEAKQVQNVLDYDDLLLYWAQMVSDPTLADDIGNRFDHVMV
DEYQDTNRLQASVLMALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPASFSPAADIIT
LDRNYRSTQPILAAANGVIDLARERFTKNLWTERQSLERPKLVTVKDETEQANFIIDQVL
ANRETGMTLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRFA
QNPRDRVAGFRLLQMLPGIGPKKAGNILDTIAADAEPLLALAEIPPPPKTGDDWTAFTQM
LVGLRRGQNGWPGEIGQARLWYEPHLERIHEDADTRKADLLQLEQIASGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLTLSTIHSAKGQEWRSVFILNVIDGCIPSDLGVGTTQEL
EEERRLLYVAMTRAKDGLSLITPQRFFTGGQSQQGDRHVYASRTRFIPATLLQFFETTTW
PVVSAAASERSAQQIRIDVGARMRAMWK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcctatctggacaagttgaacgaacaacaacgcaaggcggtggaacacggc
gtcgggctggcagaggggcagacggccggaccgctcttgatcattgcaggcgccggttcc
ggcaagaccaatacgctcgcccatcgcgtcgcgcatctgatcgtcaacggcgccgacccc
cgccgcatcctgctgatgactttttccagacgcgcagcctcggaaatgtcgcggcgtgtc
gagcgtatctgtaaacatgtcctcgggagcaattcaggtgccctgaccgatgcgctggca
tggtccggcacatttcatggcatcggcgcacgcctgttgcgcatctatgccgaacagatc
ggcctcaatatcgatttcaccatccacgaccgcgaagacagcgccgacctgatgaacctt
gcccggcacgagctgggattttccaagaccgaaagccgctttccgaccaagggaacatgc
cttgcgatctactcgcgtgcggtgaattcccagacgccgctgaaggagatcctgcgccag
cattatccttgggtcgccagctgggagagcgaacttaagcaactgttcgcggcctatgtc
gaggccaagcaggtccagaacgtgctcgattacgacgatctcctgctctattgggcgcag
atggtgagcgatcctaccctggcagacgatatcggcaaccgcttcgaccatgtgatggtc
gacgaatatcaggataccaaccggctgcaggcttcggtgctgatggccctcaaacccggt
ggccgtggtttgacggtggtgggcgacgatgcgcagtcgatctattcgttccgggctgcg
acggtgcgaaacatcctcgattttccggcatccttcagcccggcggcggatatcatcacg
cttgatcgcaactatcgctcaacgcagccgattcttgccgccgccaatggcgtcatcgat
ctggcgcgtgagcggtttaccaaaaacctctggacggagcggcagtcactcgaacgcccg
aagctggtgacggtgaaggacgaaaccgaacaggcgaacttcatcatcgatcaggtcctt
gccaatcgcgagaccggcatgacgctgaaacagcaggccgtgttgtttcgcacctccagc
cacagcggcccgcttgaagtggaactgacccgccgcaacatccccttcgttaaattcggt
ggcctgaaattcctcgacagcgcccatgtgaaggacatgctggcggtcctccgcttcgcc
cagaacccgcgtgaccgtgtcgccggtttccggctgctgcagatgctgcccggcatcgga
ccgaagaaagccggtaacattctcgatacgatcgctgcagacgccgagccgctgcttgcc
cttgccgaaattccgccgccaccgaagaccggcgacgactggacggccttcacgcaaatg
ctggtgggcctgcgacggggccaaaacggctggccaggcgaaatcggccaggcaaggcta
tggtacgagccccatctcgaacgcatccatgaggatgcggatacccgcaaggccgatctg
ctacagcttgagcagatcgccagcggttatccctcgcgagaacgatttttgaccgagctg
acgctcgatccgcctgacgccaccagtgatcaggccggcgtgccgctgcttgacgaggat
tacctgaccctgtcgaccatccattcggcaaaaggccaggaatggcgttccgtcttcatc
ctgaacgtcatcgatggctgcatcccatccgaccttggcgtcggcaccacccaggaactg
gaggaagaacgaaggctgctctatgtcgcgatgacgcgcgccaaggatggcctgtcgctg
atcacgccacaacgcttcttcaccggcggccagagccagcagggcgaccggcatgtctac
gcctcaagaacccgcttcataccggccacattgctgcagttcttcgaaacgacgacatgg
ccggttgtttcggccgcagcttcggagcgcagcgcgcagcagatccggattgatgtgggc
gcgcggatgcgggcgatgtggaaatag
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