Acinetobacter cumulans: C9E88_001270
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Entry
C9E88_001270 CDS
T06087
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
acum
Acinetobacter cumulans
Brite
KEGG Orthology (KO) [BR:
acum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acum03009
]
C9E88_001270 (rlmD)
Enzymes [BR:
acum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C9E88_001270 (rlmD)
Ribosome biogenesis [BR:
acum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C9E88_001270 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PCMT
Methyltransf_25
Ubie_methyltran
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
TRAM
Methyltr_RsmB-F
GCD14
Methyltransf_11
CMAS
RrnaAD
Methyltransf_23
FtsJ
Methyltransf_15
MetW
Motif
Other DBs
NCBI-ProteinID:
QCO20248
LinkDB
All DBs
Position
623476..624891
Genome browser
AA seq
471 aa
AA seq
DB search
MKYKAKSPKAPALSYIFQVESLSHEGRGIAHYGSHPEHPIEKQGKKVFIRYALPGETVRA
VITHTAKRLEEADSLELLSAASTMRVPAPCPHFGICGGCNMQHIHPDEQIRLKQDVLKSH
LTHFAGLSPKEWLSPLRSGREDYRCKARIGVRYLPHKDKLVVGFRENASNKLTSIDRCMV
LDQQFGSITRLKQLLQSLKGKADIGHVELAMGDAEVALLIRHTDKLCDADVNELRKFTLQ
KQWQLYLQAAGPESLVREDGQGTEMRLHYRLEEFDTTFAFSPLDFTQVNSSVNPKMVKLA
CDLLQLKPGERVLDLFCGLGNFSLPLARCVGAQGEVVAVEGSEEMVARGTENAKNNAISW
LSFYSQDLTKDFSHQTWANQGFDALLIDPPRSGAEEVMHYLPKFGAKRIVYVSCNPATLA
RDAGVLAQQGYQLSRAGVMDMFTHTGHVESIALFEQIEPTTQIDDVRSDEE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaaagccaagtccccaaaagcaccagcactaagctatatttttcaagttgag
tcgctgtcacatgaggggcgtggcattgctcattatggttcacaccctgagcatccgatt
gaaaaacagggtaaaaaagtttttattcgttatgctttacctggtgaaactgtacgcgca
gtgattactcataccgcaaagcgtttagaagaagcggatagtctagagcttctgagtgca
gcctctacaatgcgtgtgcctgcgccgtgtccgcactttgggatttgtggtggttgtaat
atgcaacacattcacccagacgaacaaattcgtttaaagcaagatgtactaaaatcacat
ttaacccattttgcaggattaagcccgaaagaatggctttcgcctttacgctcaggtcgt
gaggactatcgctgtaaagcacgtattggtgtgcgctatttgcctcataaagataaattg
gtggtgggttttcgtgaaaatgccagcaataaattgacttctattgaccgatgtatggtc
ttagatcagcaatttggttcgattacacgtttaaaacaattactccaaagtctaaaaggc
aaagctgacatcggtcatgtagaattagcgatgggggatgctgaagttgctttgctgatt
cgtcataccgataaattatgtgacgcagatgtcaacgaattacgaaaatttacgttacag
aaacagtggcaactttatttacaagcagcagggcctgaaagcttagttcgagaggacggc
caagggactgaaatgcgtttgcattacagattagaagaatttgatacgacttttgccttt
agtccattagattttactcaagtaaattcaagtgttaacccgaaaatggtgaagctggca
tgtgatttgcttcaattgaagccaggtgagcgtgttttggatttattttgtggtttgggt
aatttctctttacctttggcgcgctgtgttggtgcacaaggtgaagtggtagcggttgag
ggaagtgaagaaatggtcgctcgaggtacagaaaatgcaaaaaacaatgcaatttcttgg
ttgagcttctattcacaagatttaacaaaagatttttcgcatcaaacttgggcaaatcag
ggatttgatgcattattgattgatcctccacgctcaggtgcagaagaggttatgcattat
ctgcccaagtttggtgcaaaaagaatagtttatgtctcatgtaatcccgcaacactcgca
cgcgatgcaggtgtgttagcacagcagggttatcagctgagccgggcaggtgttatggat
atgtttacgcatactgggcacgtagagtctatcgcgttatttgaacagattgaaccaacc
actcagattgacgatgtaagaagtgatgaagagtaa
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