Acinetobacter cumulans: C9E88_009890
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Entry
C9E88_009890 CDS
T06087
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
acum
Acinetobacter cumulans
Pathway
acum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C9E88_009890 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acum03019
]
C9E88_009890 (rhlB)
Enzymes [BR:
acum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C9E88_009890 (rhlB)
Messenger RNA biogenesis [BR:
acum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C9E88_009890 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
UvrA_inter
Cas3-like_C_2
Toprim
UPF0228
Glyoxalase
Motif
Other DBs
NCBI-ProteinID:
QCO21776
LinkDB
All DBs
Position
complement(2209051..2210202)
Genome browser
AA seq
383 aa
AA seq
DB search
MSSGFDTLNLHPKLKQAIDALGFTKMTPIQQKVLKFTLAGHDAIGRAQTGTGKTAAFLVS
VINDLLNNPIKEQRFRGEPRALILAPTRELALQIESDAKELTKFTDLHLVTMLGGVDFDK
QRAELNKNFVDIMVATPGRLIDFVEQKEIWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY
SPRKEQRQTLMFSATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYMVAKSDKYK
LLQEILRDEPIEKVMIFANRRDQVRKLYDHLKKDDYKVVMLSGEIAQDKRLKMLDQFKNG
KHNIMIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGSRGVSISFLSEDDA
FYLPEIEKAIGQKLPLTRLDGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctggttttgataccttaaatttacaccctaaactgaaacaagcgattgatgct
ttaggctttacaaaaatgacgcctattcagcaaaaggttttgaaatttacgctggcggga
catgatgccattggtcgcgcacaaacaggtacgggtaaaactgcagcctttttggtgagt
gttattaatgatttattaaataaccccattaaagagcaacgtttccgtggtgagcctcgc
gcattaattttagcgccaacgcgtgaattggctttgcaaattgaaagtgatgccaaagaa
ttaactaaatttacagatttacatttagtcacaatgcttggtggtgttgactttgataag
caacgtgctgaattgaataaaaactttgtcgatatcatggtggcaacaccaggtcgttta
atcgattttgttgagcaaaaagaaatttggctagatcaaattgaatttttagtgattgat
gaagctgatcgtttacttgatatgggctttattccatcggtaaaacgtatcgtgcgttat
tcaccacgtaaagaacaacgtcaaaccttgatgttctcagcaacctttagctatgacgta
ttaaacttagcacaacagtggttgtttgagcctgttacagttgaaatcgaaccagaaaag
aaaaccaatgcagatgttgagcaacgtgtgtatatggttgctaaatcagataaatataag
ttgttgcaagaaattttacgtgacgaaccgattgagaaagtgatgatttttgccaatcgt
cgtgatcaagtgcgtaaactttatgatcatctgaaaaaagatgattataaagtggtgatg
ttgtcaggtgaaattgctcaagacaaacgcttaaaaatgttagatcaatttaaaaatggc
aagcacaatattatgattgcaaccgatgttgctggtcgtggtattcatgtggatggcgta
tcgcatgtgattaattttaccttgccagaacagtcagatgactatgtgcatcgtattggt
cgtacaggtcgtgcgggttcacgtggtgtaagtattagcttcttatctgaagatgacgcg
ttctatttgccggaaattgaaaaagctattggtcaaaaattaccattaacccgtttggat
ggttattgttaa
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