Acinetobacter cumulans: C9E88_17145
Help
Entry
C9E88_17145 CDS
T06087
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
acum
Acinetobacter cumulans
Pathway
acum02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acum00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C9E88_17145 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acum03021
]
C9E88_17145 (rpoD)
Transcription machinery [BR:
acum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C9E88_17145 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TMPIT
Motif
Other DBs
NCBI-ProteinID:
QFU78794
LinkDB
All DBs
Position
complement(992395..994284)
Genome browser
AA seq
629 aa
AA seq
DB search
MSDMNSPTSQVAALISRGKEQGYLTFAEVNDHLPDSITESEQIEDIIQMLNDVGIPVHDR
APETDDAMFEGGSDATDEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLNSIAYWPNAVEVVLKEYKDYEAGERRLADILSGYLDPETDDDIPE
VLEDESEDLDEDDASSNKSTKDVKLDDDDEDEESESDDDSEGDSGPDPEIAKARFTELEN
AWTNTKLLVEKHGRNSKEGKQALEDLASVFMMFKFTPRLFDIISEMIRGTHEQIRTSERE
VMRYAVRRGRMDRTQFRTSFPGQESNQAWLDEQIAKAPAEMKGYLEKVRPDILAFQQKIS
DIEKDLNLSVKEIKEISKRMAVGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLI
QEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINR
VSRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIED
GNITSPIDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRE
RIRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgaattcccctacttcacaagtagcggcgctgattagccgaggcaaagaa
caaggttacttaactttcgctgaggtcaacgatcatctcccggattcaatcacagaaagc
gaacagattgaagacatcattcaaatgttgaatgacgttggtattcctgtacatgaccgt
gcacctgaaactgatgatgccatgtttgaaggtggcagcgacgcaacggatgaagttgct
gaagaagaagccgctgctgtacttgcatcagttgaaaatgaaccaggccgtaccactgac
cctgtacgtatgtatatgcgtgaaatgggtacagttgaactccttacacgcgaaggcgaa
attagcattgcaaaacgtatcgaagaaggtattcgtgacgttttaaattcaatcgcttat
tggccaaacgcagttgaagtcgttttaaaagaatataaagattatgaagcaggtgaacgt
cgtcttgctgatattttatcgggttacctagaccctgaaactgacgatgatattcctgaa
gttttagaagatgagtctgaagatctagacgaagacgatgcatcatcaaacaaatcaacc
aaagatgtaaaattggatgatgatgatgaagacgaagaatctgaaagtgatgacgactct
gaaggtgattcaggcccagaccctgaaattgccaaagcacgttttactgaactagaaaat
gcgtggaccaataccaaattactggttgaaaaacatggtcgtaacagtaaagaaggcaaa
caagcactcgaagatttagcttctgtgtttatgatgtttaaatttacaccgcgcctattt
gatatcattagtgaaatgattcgcggtacacacgaacaaattcgtacctcagaacgtgaa
gtgatgcgttatgcagtacgtcgtggtcgtatggatcgtacgcaattccgtacctcattc
ccaggtcaagaatcaaaccaagcatggttagatgagcaaattgcgaaagcacctgcagaa
atgaaaggctacttagaaaaagtacgccctgatattttagctttccagcaaaaaatctca
gacattgaaaaagaccttaatttaagcgttaaagaaattaaagaaatttctaaacgtatg
gctgtaggcgaagcgaaagcacgccgtgctaaaaaagaaatggttgaagcgaacttacgt
cttgtaatctcgattgcgaaaaagtataccaaccgtggtctacaattcctcgacttgatt
caagaaggtaacatcggcttgatgaaagcggtagataagtttgaataccgccgtggttat
aagttctcgacttatgcaacatggtggattcgtcaggcaatcacgcgttctattgccgat
caagcacgtacgattcgtattcctgtgcacatgattgaaaccattaacaagatcaaccgt
gtatctcgtcaattgcttcaagaaatgggccgtgagccaacacctgaagaattgggcgaa
cgtctagaaatggacgaagtcaaagtacgtaaagtacttaaaattgccaaagagccgatt
tctatggaaacgccgattggcgatgacgaagattcgcatcttggtgatttcattgaagat
ggtaacattacctctccaattgatgccgcaacatctgaaggcttaaaagaagcaacacgc
gaagtactggaaaacttgactgaacgtgaagcgaaagtgttgaaaatgcgttttggtatt
gatatgcctaccgaccacactttggaagaagttggtaaacagtttgacgtaacacgtgaa
cgtatccgtcagattgaagcaaaagcattacgtaaattacgtcatccttctcgctctgaa
cacttacgttcattccttgagaatgactaa
DBGET
integrated database retrieval system
