KEGG   Athene cunicularia (burrowing owl): 113477167
Entry
113477167         CDS       T05777                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:acun00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113477167 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acun03019]
    113477167 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:acun04812]
    113477167 (VIM)
   04147 Exosome [BR:acun04147]
    113477167 (VIM)
Messenger RNA biogenesis [BR:acun03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     113477167 (VIM)
Cytoskeleton proteins [BR:acun04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     113477167 (VIM)
Exosome [BR:acun04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113477167 (VIM)
  Exosomal proteins of other cancer cells
   113477167 (VIM)
SSDB
Motif
Pfam: Filament DUF1664 TolA_bind_tri Phage_GP20 DUF7491 DUF4200 2_5_RNA_ligase2 BLOC1_2 DUF4515 LAMB4 RBD-FIP TPR_MLP1_2 CENP-F_leu_zip T2SSF
Other DBs
NCBI-GeneID: 113477167
NCBI-ProteinID: XP_026699128
LinkDB
Position
2
AA seq 310 aa
MPGLKVALCPILIVKETGIPPLPPHRCLAPSRLQEEMLQREEAENTLQSFRQDVDNASLA
RLDLERKVESLQEEIVFLKKLHDEEIRELQAQLQEQHIQIDMDVSKPDLTAALRDVRQQY
ESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQEANEYRRQIQSLTCEVDALKGS
NESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIE
IATYRKLLEGEESRINMPIPTFASLNLRETNIESQPMVDTHSKRTLLIKTVETRDGQVIN
ETSQHHDDLE
NT seq 933 nt   +upstreamnt  +downstreamnt
atgccgggacttaaagttgctttatgccccattttgatagtaaaagaaacagggatcccc
ccgctccctcctcaccgctgtctcgccccttccaggttgcaggaggagatgctgcagcgg
gaggaggctgagaacaccctgcagtccttcagacaggatgttgacaatgcttccctggca
cgtcttgatcttgagcgcaaagttgagtccctgcaagaggagattgtcttcttgaagaag
cttcatgatgaggaaatccgagaactgcaggcccagctccaggaacagcacatccagatt
gatatggatgtttctaagcctgatcttactgctgccctgcgtgacgttcgccaacagtat
gaaagcgttgctgctaagaatcttcaggaagctgaagagtggtacaagtccaaatttgca
gatctctctgaagctgctaacagaaacaatgatgccctgcgccaggccaaacaagaagct
aatgaataccgcagacagattcaatctctcacctgcgaagtggatgcccttaagggaagc
aatgaatccctggagcgccaaatgcgtgaaatggaggagaattttgctgttgaagctgct
aactaccaagacactattggccgtctgcaggatgagattcagaacatgaaggaagaaatg
gctcgccatctccgcgagtaccaggacctgctgaatgtaaagatggctcttgatattgag
attgccacctacagaaaactgctggagggtgaagagagcaggattaacatgcctattcca
acctttgcttctttgaacctgagagaaaccaacattgagtctcagccaatggttgatact
cactcaaagaggacacttctaattaagaccgtcgaaactagagatggacaggttattaat
gagacttctcagcatcatgatgacttggagtaa

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