Athene cunicularia (burrowing owl): 113478419 Help Entry 113478419         CDS       T05777                                  Symbol SCAF8 Name (RefSeq) protein SCAF8 isoform X1   KO K13191   RNA-binding protein 16 Organism acun  Athene cunicularia (burrowing owl) Brite KEGG Orthology (KO) [BR:acun00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:acun03021]     113478419 (SCAF8)    03041 Spliceosome [BR:acun03041]     113478419 (SCAF8) Transcription machinery [BR:acun03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      113478419 (SCAF8) Spliceosome [BR:acun03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA binding proteins (RBPs)     113478419 (SCAF8) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CID RRM_1 RRM_occluded Motif Other DBs NCBI-GeneID:  113478419 NCBI-ProteinID:  XP_026701428 LinkDB All DBs Position 3 AA seq 1357 aa AA seqDB search MLLTSLRLCLMKLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEY KVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQ KNNVFKSEIIQPLLDMAAGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDP WVSQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALT AQLTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPTSQLPLVSESVNN SLFHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFLE VETNVDDSMDIQQQDMDIDEGQDVAEEEIFEQEEKKSTVRSRSRTRSRSRSRSPRKRRSR SRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCST TLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSY KIGSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNT EWETARSSEATKENTQTTQSAAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPA FPVTMSVPPPGYSAIPPPPFLRASFNPSQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTP LVQPPLPIAQETMKDVPFTSLVLPVGTVTSNLVTPTLSAGNVFNPLPINKPESDEKGSHL TDLQISSSENNRSVQTDVSSSSGLGVQPPSVSSSSGLTGEGQPPSVSSSSGLAGGVQPPS ISSSSGLVGGVQPPIVSSSSGLAGGVQLPTVSSSSSLAGGVQPTSVSSSSGLMAGVQPPN VSSSSGLLAGVHPPSVSSSPGLLTGMQPPSVSSSSGVLAGVQPPSVSSNSGLLIMPPPNV SSSSGLMGVPPPNISSSSGLLAMQHPAGVQNMPHLNISSQRMPGMPLIDIRPGLMPHSPG PRFPLMQPGMPPQRSIPPPAILDPSLHPPPRGPFPPGDIFNQTERPFGTPGRQNIDSISN PEKRLPLGGDNIQQEGDRDYRFPPVENRDNLNRPSTVDVRDSVGRPPVDPREGIGRPPVD GREHFARPHVDMRENFGRPGIDNLGRREHFGFNSDKHWGQRGDYDEREHHAFPVYGGPKG FHEDRERFRHVNYRFDSRSGPNWNRGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREIN GNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKSENMPQVNGENTETESQPPTAQVQDDP ELYEKLTSSVEINKEKSDTEADIESEPVVESTETEGT NT seq 4074 nt NT seq  +upstreamnt  +downstreamnt atgcttctgacctccttgaggctctgcctgatgaagttgtactcgctaaatgattataag ccacccatttctaaagctaaaatgacacagatcaccaaggcagcaatcaaggctataaag ttctacaagcatgttgtacagagtgttgagaaattcattcaaaagtgtaaaccagaatac aaggtacctggtctgtatgtcattgactccattgtaagacagtcccggcatcagtttgga caagaaaaggatgtgtttgctccaagattcagtaataacatcatcagcactttccagaac ttgtaccgttgtcctggggatgacaagagtaaaattgttagagtgttaaatttatggcag aagaataatgtgttcaagagtgaaattattcagcctctcttggatatggctgcaggaatt cctccgccagttgtgacccctgtcttgcccagcactacagctgctatgagcaacaatacc ccaggaacacctgtgactccagttactccagccaatgtggtgcagagtttacctgatcct tgggtatctcagattgctaatacagatacccttgctgctgttgcacagattcttcagagt cctcaaggccaacagcttcagcagttgatacagacactgcagatacaacagcagaaacct cagccttcactacttcaagctctggatgctggtcttgtcgttcagctacaggccctcaca gcacaacttacagctgcagctgctgctgctaacacacttaatccactggaacaaagtgtc tcttttaataagaagctgatggacaggtttgactttggggaagaatctgaacaaaatgaa gagcctaaaaaggaaactcccacatcccaactgcctttagtatcagaatctgtgaacaac tcactttttcaccaactagctgaacagctacagcaacaaaatttagaacatctcagacaa cagcttctggagcaacagcagcctcaaaaggcaagtcctgaggagaatcaagaaggaaat tttggttcagagcactctgcctcaccatcacaagggagtagtcagcagcagtttttagaa gtggaaacgaatgtagatgattcaatggatattcaacaacaggacatggatatagatgaa ggacaggatgttgctgaagaggagatttttgaacaagaggaaaagaaatcaactgttcgt tcaagatcaagaactcgctcaagatctcgttcaaggtcaccaagaaaacgaaggtctaga tcacggtctgggtctcgtaaacgtaaacatagaaaacgttcacgctcaagatcaagagaa aggaagagaaagtcatctcgatcatattccagtgaaagaagagctagagaaagggaaaaa gaacgtcagaaaaagggattgcctcctatacggtcaaaaacactaagtgtttgcagtact actctttgggtaggtcaagtagacaagaaggctacacagcaagatttgactaacttgttt gaagaatttggacaaatagagtcaattaatatgattcccccaagaggttgtgcttatgtt tgtatggttcatagacaagatgcttatcgtgctcttcagaaacttagttctgggtcctat aaaataggatctaaaattattaagattgcctgggctttgaataaaggtgtcaaaacagaa tataagcagttctgggatgtggatctgggagtttcgtatattccttgggagaaagtaaaa ttggatgatttggagggctttgctgaaggtggcatgattgaccaggaaacagtaaataca gaatgggaaacagccagaagctcagaagccactaaagaaaatactcaaactacacagagt gctgcagttgataagagtacagttattacaacacagacagaagcttacacacaaccagtc actatgctgcagattccagtagctccagctgtgcctgctgttagcttggttccacccgca tttcctgtcacaatgtctgtccctcctcctggttatagtgcaattcctcctccacccttc ttgagagcaagtttcaacccttcacagccacctccaggttatatgcctcccccagttcca cctgtggttccaccacctgttgtcccgccacctgttgtcccaccagttgttccaacacct ttagtacagcctccgttaccaattgcacaagagacaatgaaggatgttccttttactagc cttgttctaccagttggcacagttactagcaatctagttactccaacattatctgctgga aatgtttttaatcctctgccaatcaacaaaccagaatcagatgaaaagggatcacatctt acagaccttcagatttcttccagtgaaaacaatagatctgtgcaaactgatgtctcaagt agctctggacttggagtgcagccacccagcgtctcaagcagttctgggcttactggagaa gggcagccacccagtgtctcaagtagctctggacttgcagggggagtacagccacccagt atttcaagcagctctggacttgtaggaggagtgcagccaccaattgtttcaagcagttct ggtcttgcaggaggagtgcagctacctactgtttccagtagctcttctcttgctggcgga gttcagccaaccagcgtctcaagtagctctggacttatggctggagtgcaaccaccaaat gtctcaagtagctcaggacttctagctggagtgcatccacctagtgtctcaagcagccct ggccttctgaccggaatgcagccacccagtgtctcaagcagctcaggagttctggcagga gtgcagccaccaagtgtctcaagcaactctgggctgcttataatgccaccacccaatgtt tcaagtagttctggacttatgggagtgccaccaccaaatatttcaagtagttctggactt ctggcaatgcagcatccagctggggttcaaaacatgcctcatttaaatattagtagtcaa aggatgccgggaatgcctctcatagatatccgtccaggccttatgccccattcgcctgga ccaaggtttccattaatgcagccaggaatgccaccacagcgtagcattcctcctccagca atccttgatccatctcttcacccaccacctcgaggtccttttcctccaggagatattttt aatcaaacagaaagaccttttggaacaccaggaagacaaaatattgatagcatttctaac ccagagaaaagactaccacttggaggcgataacattcagcaggaaggagacagagattat cgcttccctccagtggaaaaccgagataatctcaacaggccatctacagtggatgtcaga gattctgttggacgaccaccagttgatcccagagagggtataggaaggcctccagtagat ggaagagaacattttgcaagaccacatgtagacatgagagaaaattttggaagaccaggt atagataaccttggtcgaagagagcattttggtttcaattcagacaagcactggggacag agaggagattatgatgaaagagagcaccatgccttccctgtttatggtggccctaaaggc ttccatgaagacagagagcggtttcgccatgttaactataggtttgatagtagaagtggt cccaattggaatagaggatttgaacaagatgctcacagagattttgatgaccgccgaaga ccctgggaaagacagagggatagggatgacagagattttaatttttgcagagaaattaat gggaacaggtttggaagagacagaatgtcaaacaactggattccccctccacatccacgg gtttttgaatattttgatggggccacttcccaacgcaaatctgagaatatgccccaggta aacggtgaaaatacagagacagaaagtcagccaccaactgcacaggtgcaggacgatcca gaactttatgaaaaactgacatcttccgtcgagataaacaaagagaagagtgacacagaa gctgatatagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa

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