Athene cunicularia (burrowing owl): 113478504
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Entry
113478504 CDS
T05777
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03008
Ribosome biogenesis in eukaryotes
acun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113478504 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
113478504 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acun03021
]
113478504 (XRN2)
03019 Messenger RNA biogenesis [BR:
acun03019
]
113478504 (XRN2)
03009 Ribosome biogenesis [BR:
acun03009
]
113478504 (XRN2)
03016 Transfer RNA biogenesis [BR:
acun03016
]
113478504 (XRN2)
Transcription machinery [BR:
acun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113478504 (XRN2)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
113478504 (XRN2)
Ribosome biogenesis [BR:
acun03009
]
Eukaryotic type
Pre-60S particles
RNases
113478504 (XRN2)
Transfer RNA biogenesis [BR:
acun03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
113478504 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
113478504
NCBI-ProteinID:
XP_026701579
UniProt:
A0A663MRB4
LinkDB
All DBs
Position
3
AA seq
949 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKAPIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPIAEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRMKRDQPSFIPGGQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNSTTSSPNTSLT
SDGSPSLTGGIKRKAEDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQS
YVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGV
FPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAA
LEEVYPDLTPEENRRNSLGGDVLFVGKHHPLCDFVVEQYKTKNTEPVDIPPELCHGIQGK
LTLNENAVLPDQAVESPVPMLRDLAQNSAVSISFKDPQFDEDFVFKATVLPGAKKPAPVL
KPGDWEKTNSDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHTMPRERGMPGMYANAVPLGT
YGSPYARPLLSGQQQIPKLLSNLRPQDSWRGPTPLFQQTPQRTAGAAPLLAWNRMLQSQN
QYQPSQYQGLGGPMSYPQRPEDRMDRGRQGYGPGRPYPLPPPSGRYSWN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggccttctttcgctggctcagccgcaaatacccctccatcatcgttaac
tgcgtggaggagaaggctaaagagtgcaatggtgtcaaggctccaattgatacaagcaaa
cctaaccctaatgaggtggagtttgataacctatacttggatatgaatggtataattcac
ccttgtacacatccagaagacaagccagcacccaaaaatgaagatgaaatgatggttgcg
atttttgagtatattgacaggatcttcaatattgtaagaccaaggcgacttctttacatg
gctatagatggagtagctccacgtgcaaaaatgaaccaacagcggtcaagaagattcaga
gcatcaaaggagggcatggaagctgctgaagagaagcaaaaaataagacaagaaattctg
gcaaaaggtggcattcttcctccagaagaagtgaaagagagattcgacagcaactgtatt
accccaggaactgagtttatggacaatcttgctaaatgtctccgctattacattgctgac
cgtttgaacagtgacccagggtggaaaaatttgacagttattttgtctgatgctagtgct
cctggtgaaggtgaacataaaatcatggattacattagaagacaaagagctcaaccaaac
catgacccaaacactcatcattgtctgtgtggggctgatgctgatctgattatgcttggg
ttagctacacatgaaccaaacttcactataattagggaagagtttaaaccaaataaacct
aagccatgtgctctttgtaaccagatgggtcatgaggttaaagattgccaaggtctaccc
agagaaaaacaagggaagcacgatcagtttgcagacagtcttcctattgctgaacaagaa
tttatcttcatccgactatgtgttttgcgagagtatttggaaagagaactcactatggcc
agtttgcctttcacttttgattttgaaagaagtgttgatgactgggtctttatgtgcttc
tttgtgggaaatgactttcttcctcatctgccatctttggagatcagggagggagcaatt
gatcgcttggttaacatatataaaaatgtggtgcacaaaactgggggctatctcacagaa
agtggttttgtcaacctacagagggtccagatgatcatgttagctgttggagaagttgaa
gatagtattttcaaaaagagaaaagatgacgatgataactttaaaaggagacaaaaagaa
aaaagaaaaagaatgaagagagatcagccttcttttattcctggtggacagttttcccct
caagctctgggaaatcgatctagtcctcaagcaatcagtaaccctagacaagctgccttt
gagatgagaatgcatgacagacagaattctacaacttcatctccaaataccagcctcact
tccgatggcagcccatccctgacaggaggaattaagcgaaaagctgaagatagtgacagt
gaacctgagccagaggataatatcaggttatgggaaactggttggaaacagcgctactat
aaaaacaaatttgatgttgatgcttctgatgagaaattccgtcgtaaagttgtacagtcc
tatgtggaagggctttgctgggttctcagatattattatcagggctgtgcatcctggaac
tggtattacccttttcactatgctccatttgcttctgactttgaaggtattgcagacatg
ccttcagattttgagaaaggctcaaaaccgtttaagcctcttgaacaacttatgggagta
tttccagctgcaagtggaaattttctgccaccaacatggaggaagctcatgacagatcca
gaatcaagcataattgacttctaccctgaagattttgctattgatttaaatgggaagaaa
tacgcttggcaaggtgttgcgttattaccatttgttgatgagcgacgccttagagctgca
ctggaagaagtctacccagacctcactcctgaagaaaacagaagaaatagccttggtggt
gatgttctctttgttggaaaacaccatccactttgtgactttgttgtagaacagtacaag
accaaaaatacagagccagtagatatacccccagaactgtgccatggaatccagggaaag
cttacgctgaatgaaaatgctgttctcccagatcaggcagtggagtctcctgttccaatg
ctgcgtgatcttgcacaaaattctgcagtcagtatctctttcaaagatccacaatttgat
gaagactttgttttcaaggccacagtgttaccaggtgcaaagaaacctgctccggttctg
aagccaggagactgggaaaaaaccaacagtgatggcaggccttggagaccacagctgggt
tttaaccgagacagaaaaccagtccatttggaccagtcagcttttagaactttaggccat
acgatgccaagggaacgaggaatgccgggaatgtatgccaatgcagtacctcttggaacg
tatgggagcccgtatgccaggccgcttctgagtgggcagcagcagattccgaaattgttg
tcaaatcttagaccccaggattcttggcgaggtcctacgcccttgtttcaacagacacca
cagagaactgctggggctgctccgcttcttgcctggaaccgcatgctgcaatcccaaaat
cagtaccagccaagtcagtaccaagggctgggtggaccaatgagttacccacagagacct
gaagatcggatggacagaggaagacagggatacggccctgggaggccctacccgctccca
cctccctcaggaagatacagctggaattag
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