KEGG   Athene cunicularia (burrowing owl): 113478513
Entry
113478513         CDS       T05777                                 
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun04382  Cornified envelope formation
acun04510  Focal adhesion
acun04512  ECM-receptor interaction
acun04518  Integrin signaling
acun04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:acun00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113478513 (COL4A1)
   04518 Integrin signaling
    113478513 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113478513 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113478513 (COL4A1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    113478513 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:acun04147]
    113478513 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:acun00536]
    113478513 (COL4A1)
Exosome [BR:acun04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   113478513 (COL4A1)
Glycosaminoglycan binding proteins [BR:acun00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113478513 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 113478513
NCBI-ProteinID: XP_026701600
LinkDB
Position
1
AA seq 1673 aa
MERASSVAAVYAKQVGLGTGYHSLLGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQ
GPEGPPGPPGLKGDTGEPGLPGTKGTRGPPGASGFPGNPGLPGIPGQDGPPGPPGIPGCN
GTKGERGPVGPPGLPGLTGSIGPPGPPGMKGDPGEVIGLLPPSVLKGDKGFPGQPGLPGP
PGTPGFQGPMGPQGPPGDPGPPGPPGLPGEKGYMGLGFQGPKGEKGEQGVRGPPGPPGPA
PHMKEKGSEVIKGEKGDPGEKGEQGTPGLPGSGFKGEKGEPGKPGPRGKPGKDGEPGPKG
EVGLPGGFGIPGRPGEPGTKGDKGERGFPGPPGRFIDPGPVDRFGEKGEPGASGLPGAKG
QKGEKGFPGIQGIPGLPGQPLPDRVGSPGVPGERGEKGEKGSPGFPLPGPPGRDGFPGPP
GLPGPPGPPGKTDGIDQCQQGEPGAPGSPGLPGRDGFPGEMGEKGDKGESCALCDKVGPP
GLPGPQGPPGPAGFPGQSGFKGDRGLPGLDGLPGVPGPPGTPGLMGSPGAKGEPGDFSYD
SILKGEKGDPGFPGQPGTPGREGRPGKDGLPGLQGPKGASGTAGLKGERGPPGQPGFPGV
RGERGFPGPPGIGTAGFPGDKGDRGFAGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGP
PGFPGPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGNPGTP
GLDGLPGVPGLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKGSPGLPGLRGEQGFPGIPG
QQGFRGDPGLPGLQGLQGPPGAPGLGPQGSPGPAGQPGPQGPPGFPGIKGERGFPGIPGL
DMPGPKGDKGSQGQPGVPGSVGLPGLPGPQGAIGLKGSSGPKGEMGVMGTPGLPGTPGPV
GDRGLPGEKGSQGFKGVIGPQGDPGVKGDKGEAGLPGKPGTMDNMDMVSLKGQKGDQGEK
GDHGATGEKGLRGEYGEPGIPGKDGEPGTPGHPGPKGDQGPPGYPGDPGIPGQKGSVGEM
GLPGTPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAPGFPGTGFPGSPGEKGEPGRTGSPG
LPGDKGEKGSEGMPGMPGSPGPKGSPGMAGFPGSPGRHGEKGEKGLPGLSGIPGLKGEPG
EPGFPGPAGSIGQKGEPGYDGIPGAAGAKGEQGIPGRGLPGLPGAKGDKGAKGDVGFPGS
PGSPGIPGLKGEPGYDGPPGPKGNQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPP
GPPGLKGAKGEQGSNGWPGTPGGPGVKGDPGFQGLPGSPGLPGDTGQKGDLGPPGVPGVP
GPKGSPGFPGLKGERGDQGLPGSKGLQGPPGPPGAFQLVKGDPGLPGPVGPVGLKGFPGL
PGPKGQQGVTGPSGVPGPPGSPGFDGKPGQKGEVGPYGPPGPRGFPGPPGPEGLPGAMGP
PGAPSVAHGFLVTRHSQTTEEPSCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRK
FSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCSVCEAPAM
VIAVHSQTIQIPQCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIEC
HGRGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRKT
NT seq 5022 nt   +upstreamnt  +downstreamnt
atggagagagcatccagcgtggctgccgtttatgctaagcaagttggactaggcacgggt
taccactctttgctgggttgttccggttgtggaaaatgtgactgcagtggagtaaaaggg
caaaagggagaaagaggcttgcctggactacagggtgtgattgggtttcctggaatgcaa
ggacctgaaggtccccctgggccaccagggcttaagggtgatactggagaaccaggactg
ccaggaacaaaaggaacaagaggccccccaggagcatcaggctttccaggaaacccaggc
cttcctggcattcctggacaagatggccctcctggtccacctggcattccaggatgtaat
ggcacaaagggtgaaagaggtccagtaggtcccccaggtttaccaggactgactgggagc
ataggacctccaggacctcctggaatgaagggagatccaggtgaagtgattggtctttta
cctcctagtgtgctaaaaggtgataaaggctttcctggccaacctggactacctggtcca
cctggaactccagggtttcagggaccaatggggccacaaggtcctccaggagatccaggt
cccccagggccaccaggactcccaggcgagaagggctacatgggcttgggctttcagggt
cccaaaggtgaaaagggagaacaaggggtaaggggccccccaggccccccaggaccagca
ccacatatgaaagaaaaagggagtgaagtcataaagggagaaaagggtgatccaggtgaa
aagggtgaacagggtactccgggattgccaggttcgggtttcaaaggagaaaagggtgaa
cctgggaagcctggtccacgtggaaagcctggaaaagatggtgaaccaggaccaaaagga
gaagtcggtttgcctggtgggtttgggattccaggacgacccggggagcctggtacaaag
ggtgacaaaggtgaacgaggttttccaggacctccaggaagatttatagatcctggacca
gtagatagatttggtgaaaaaggagagcctggagcttcaggtttgccaggagcaaaaggt
caaaaaggtgaaaaaggtttccctggcatacaaggaatcccaggacttccaggtcaacca
cttccagacagggtaggatcacctggtgtccctggagaaagaggtgaaaaaggtgaaaag
ggttctccaggattccctttacctggaccccctggaagagatggtttcccaggtcccccg
gggttgcctggcccaccaggtcctccaggcaaaacagatgggattgatcaatgccagcag
ggagaacctggtgcaccaggtagtcctggacttccaggaagagatggatttccaggagag
atgggagagaaaggtgacaaaggtgaatcctgtgccttatgtgataaagtaggacctcct
ggacttccaggaccacaagggccaccaggtccagcaggttttccaggacagtcaggtttc
aagggtgacagaggcttacctggacttgatggccttccaggggtacctgggccccccggg
actccaggacttatgggcagccctggggcaaaaggagaaccaggagatttttcttatgat
tctatcctgaaaggtgaaaagggagatcctggtttcccaggacaaccaggtactcctgga
agagaaggaagaccaggaaaagatggattgccaggtctccagggtccgaaaggagcatcg
ggtacagctggcttgaaaggagaacgtggtccccctggccaacctggattccctggagta
cgtggtgaaagaggttttcctggccctcctgggataggcactgcagggtttccaggtgac
aaaggagacagaggctttgctggaaccccaggtttaccaggccttccaggagcaaagggt
gaagcaggacgaactgtaccgctccctggacctcctggggctgatggccttcctgggcca
cctggtttccctggaccccaaggtgacaaagggaatcctgggcttccaggtagacctggc
ctgccaggagaaaaaggtgctgttgggcagccaggtataggattccctggacctccagga
cccaaaggtttccaaggtcagcctggctcacctggtctgccagggaatccgggaacccct
ggcctggatggcttgccaggtgtaccaggtttacaaggtcaaaaaggtgaacctggtgta
ggtctccctggacctaaaggattgccaggccccccaggcccagctggcatccctggagaa
aagggaagtccaggactgcctggcttacgtggcgagcaaggctttccaggcatacctgga
cagcaaggattcagaggtgaccctggcctcccaggactgcaaggcttgcagggccctcca
ggtgcaccggggctgggcccacagggatcgccaggacctgctgggcagccgggaccccag
ggaccaccaggatttcctggaattaaaggagaaaggggcttccctggtatcccaggtcta
gatatgccgggaccaaaaggggataaaggtagccagggccagcctggagtaccagggtct
gttgggttacctggcctgccgggtccacagggggccattggactgaaaggatcatcagga
cccaaaggagaaatgggagttatgggaactcctggactgccaggaactcctggaccagtt
ggagatcgagggttgcctggtgaaaaaggtagccaaggtttcaaaggtgtaattggacca
cagggtgatcctggtgtcaaaggagataaaggtgaagctggtctcccaggaaaacctgga
acgatggacaacatggacatggttagtctcaaaggccaaaagggagatcaaggagaaaaa
ggggaccatggagcaacaggagaaaaagggttacgtggggaatatggagaaccaggaatt
ccagggaaggatggtgaacctggtactccaggacatccaggaccaaaaggtgatcagggc
cccccagggtacccaggggatccaggaattccgggacaaaaaggatcggttggtgaaatg
ggtttgccaggaacaccaggagaaaagggtctgccgggaataccaggttcaccaggcaca
ccagggttccctgggcaaaaaggtgaaaaaggagacaaaggagcaccaggttttcctgga
actggctttccagggtctcctggtgagaagggagaaccaggaagaacgggtagtccaggt
ttacctggagataagggtgaaaagggtagtgaaggaatgcctggaatgccgggttctcca
ggtcccaaaggatcccctggaatggcaggatttccagggagccctggccgtcatggagaa
aagggtgaaaaaggacttcctggcttaagtggcattccaggtttaaaaggagaaccaggt
gaacctggttttccgggtcctgctggttccattggacagaagggtgaaccaggttatgac
gggattccaggtgcagctggtgcaaagggtgaacaaggtattccaggcagaggacttcca
ggattacctggtgcaaagggagataaaggtgcaaaaggtgatgtgggctttccaggatcc
ccaggaagtccggggatcccaggcctgaaaggagaaccaggatatgatggtccaccaggc
cctaagggcaaccaaggtcttcctggactaccaggaagtgcaattgagggccctaaagga
gacagaggaccccaaggccaacctggccttccaggtttacctggtccaacagggccacca
ggacccccaggtctgaaaggggccaaaggagagcaggggagcaatggctggcctgggact
cctggaggtccaggagtcaaaggtgatccaggtttccagggactgccaggtagtcctggt
ttaccaggagatactggtcaaaagggtgatctgggacctccaggagttccaggtgttcca
ggtccgaaaggatctcctggcttcccaggccttaagggtgagcggggtgaccaaggtctt
cctggttctaaaggtttacaaggcccaccaggcccaccaggtgcttttcagcttgttaaa
ggggatcctggtttacctggccctgtaggaccagttggtctcaaaggattcccgggactt
ccaggtcccaaaggacaacaaggggtgacaggaccttcaggtgtacctggaccacctggt
agcccaggatttgatggtaaacctggtcagaaaggagaagttggtccttatggaccccca
gggcccagaggattccctggtccacctggccctgaaggtttgcctggggctatgggccca
ccaggtgcaccatctgttgctcatggcttccttgtcaccagacacagtcagaccactgaa
gaaccatcgtgtccatttggaaccaggctgatttaccatggctactccttgctttatgta
caaggcaatgaaagagcacatggccaagatctgggcacggcaggaagctgtcttcgtaaa
tttagtaccatgcctttcttattctgtaatatcaacaacgtctgtaactttgcgtcaagg
aatgactattcctactggctgtccactcctgaacccatgccaatgagtatggctcctatc
accggtgataatatcagaccattcatcagcagatgctctgtgtgtgaagctcctgctatg
gtaatagctgttcacagtcaaacaattcaaataccacaatgtcctgaaggctggagttca
ctttggattggttactcctttgtcatgcacactagtgctggtgcggagggctctggccag
gccctggcgtctcctggttcctgcctagaggagtttcgcagcgctcccttcattgaatgc
catggccggggcacctgcaattattatgcaaatgcttacagcttctggcttgccactata
gagaggaatgagatgttcaagaaaccgactccctcaactttgaaagcaggggatctgcgc
tcaaacgttagccgttgtcaagtctgtatgagaaaaacataa

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