KEGG   Athene cunicularia (burrowing owl): 113478716
Entry
113478716         CDS       T05777                                 
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun04510  Focal adhesion
acun04512  ECM-receptor interaction
acun04518  Integrin signaling
acun04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:acun00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113478716 (COL9A1)
   04518 Integrin signaling
    113478716 (COL9A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113478716 (COL9A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113478716 (COL9A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:acun00535]
    113478716 (COL9A1)
Proteoglycans [BR:acun00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   113478716 (COL9A1)
SSDB
Motif
Pfam: Collagen Laminin_G_2
Other DBs
NCBI-GeneID: 113478716
NCBI-ProteinID: XP_026701930
LinkDB
Position
3
AA seq 921 aa
MKMKSNWKTTAFFYVCSFLWSFISATIQQQSRLPVILGASQRTDLCPTIRIGQDDLPGFD
LISQFQIEKAASQGVIQRVVGSTSLQVAYKLGLNVDFRIPTSAIYSNGLPDEYSFLTTFR
MTGATLQKYWTIWQIQDSSGKEQVGVNLNGPMKSVEFSYKGVDGSLQTASFLHLPFLFDS
QWHKLMISVEANSVTLFIDCIKIESLNIKPKGKISIDGFAVLGKLKNNPDISVPFEIQWM
VIHCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGP
PGPPGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGATGPKGQKGEPGLPGARGLPGKGLL
GPPGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRP
GHAGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPK
GTKGARGLDGEPGPQGLPGAPGDRGQRGPLGEAGPKGERGPQGTRGINGLPGPKGESGLP
GVDGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGVKGIAGPKGNRGPPGVPGLM
GNSGKPGQQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPPGLP
GGKGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGTVGNPGEPGSRGPEGSR
GLPGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLAQLAAS
LRRPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGER
GERGFPGRGLKGYPGPRGLPGEPGKPSYGSEGRDGQRGLPGVAGQPGVPGPPGPPGPPGY
CEPSSCRMEAGQRVGKNMKGP
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgaagatgaaaagcaactggaaaactacagctttcttttacgtgtgtagttttctgtgg
tctttcatctcagccaccatccagcaacaatcaagactaccagtcattctgggtgccagt
cagagaacggatctctgcccaacaatcaggattggccaagatgacttaccaggctttgat
ctgatttctcagttccaaatagaaaaagctgcttcccaaggagttatccagagagtagtg
ggctccacttctttacaagtggcttataaattgggactcaatgtagacttcaggatccca
accagtgccatatattccaacggattgcctgatgaatattcctttctaactacttttcgg
atgactggggccacacttcagaaatactggactatttggcagattcaggactcttcagga
aaagaacaagttggagtgaatcttaatggcccaatgaaaagtgttgagttttcttataaa
ggagtggatggaagtctccaaaccgcatcatttttgcatttgcctttcttgtttgactcc
caatggcacaagcttatgataagtgtggaagcaaacagtgtcacacttttcattgactgt
attaaaatagaatccttaaacataaagccaaaagggaaaatcagcattgatggctttgct
gtgcttggaaagcttaaaaataaccctgacatttcagttccgttcgaaatccagtggatg
gtgattcactgcgacccgctgcgaccccagcgcgaaggctgcggcgaactgccggcccgg
ataagccagacggtaatcgagagaggtctccctggtccaccaggccccccaggtccgcca
gggccaccaggagttcccggaatcgatggtattgatggggagagaggtccgaatggcccc
cccggtccaccgggtccggatggggatgcaggcaaaccaggatcccctggcctgcctgga
gagccgggagctgatggattcacaggacctgatggctcacgtggagccacaggaccaaaa
ggacagaagggtgaaccaggactgccgggtgctcgtggacttccgggcaaggggcttctt
ggaccacctggtccagctggtgcagcaggacttcctggggaagtaggtcgtgctggtcca
cctggagatccaggaaaaagagggccaccagggccaccagggccaccaggtcctcgagga
acaattggcctgcaagatggtgacccgttgtgtcccaatgcttgtccacctggccgccca
ggacatgctggcttaatgggaatgaagggacagaaaggttcaaaaggagaatctggtgaa
ccaggaaaacaaggttataagggtgaagaaggggaccaaggtcccagtggtgaagtggga
gctcaaggccctccaggcatcctaggtatcagaggtataactggtataatgggacctaaa
ggtaccaaaggagctcgtgggcttgatggtgagcctggtccccaaggtcttcctggtgct
cctggggatcgaggacagaggggtccactgggagaggcaggtccaaagggagaaaggggc
cctcaaggtacaagaggaataaatggtctccctgggcctaaaggagagtctggcttacca
ggagtcgatggccgagaagggatccctggaatgcctggagcaaaaggtgaaccaggaaaa
cctggagctccaggtgatgcagggcttcagggactgccaggtttaccaggctctccaggt
gtgaaaggcattgctggcccaaagggcaatagaggtccccctggggtgccaggtttgatg
ggaaattctggtaaaccgggtcaacaggggccggagggagaagcaggtccaacaggaccc
cggggaccaccaggtagcagaggggagccaggtcctgcaggtcctccaggattaccaggg
aaatggggtccccagggtgatattggactccctggactgccaggtcctccaggccttcct
ggtggtaagggtgaccggggctcagtgggtgaaccaggacctaagggtgaacaaggtgca
cctggagcagaaggagatggaggagaaaagggtgacttgggtgatatgggattaccagga
gcaaagggaactgttggtaatcctggagaacctggttcccgtgggcccgagggaagtcga
ggactgcctggcatggaagggccacgaggctcacctggcccgcgaggcttgcagggtgaa
cagggtgccccaggtctgcctggcagccaaggtccagctggaaaagaaccaactgatcag
cacattaagcaggtttgcatgagagtcatgcaagaacaactagctcagctggcagccagt
cttaggaggccagaatttggtgctccaggtcttcctggccgaccagggccaccaggtgct
ccagggcctgctggtgaaaatggtttcccaggacagcttggaccacgtggcttgcctggc
cttaaaggtccccctggtgagatcggtcgtaaaggtcctaaaggtgaaccaggagaaaga
ggagaaagaggatttccaggcagaggactgaaaggttaccctggaccaagaggtcttcca
ggtgaaccaggcaaacccagctacggcagtgagggccgtgatggtcaacgaggtctccct
ggggtggccggtcagcctggggttcctggtcctcctggcccccctggccctcctgggtac
tgcgagccatcgtcttgcagaatggaggctggacagagagttggtaagaacatgaaaggg
ccatga

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