Athene cunicularia (burrowing owl): 113479320
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Entry
113479320 CDS
T05777
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113479320 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acun03021
]
113479320 (POLR1A)
Enzymes [BR:
acun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113479320 (POLR1A)
Transcription machinery [BR:
acun03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113479320 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
HMG_box
Motif
Other DBs
NCBI-GeneID:
113479320
NCBI-ProteinID:
XP_026702921
LinkDB
All DBs
Position
4
AA seq
1708 aa
AA seq
DB search
MRPPKVVPWRRLAGVSFGMYTAEEIRKLSVKPITNPQYLDNVGNPATNGLYDLALGPPDS
REVCATCVQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEKGLLHAVHDLEVILNRFLEQCADATGSEIEEELNHHVQEILQSYQLTDQCSN
VKNVCECRNKLIAQFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYRKSGEEGV
LDEPLAIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHDSSGFSPDMFFL
DLLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVMKDAQLIRKLLVFMAKEQCQPIKIAEKI
QTEAEENNEPLDHSVLTMIPGQTIADKLYNAWIRLQSHVNVVFDSDMDKLTTEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTLLSASSLTQREALAKQLLTPSSGAPQSGLKIVCR
HIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELIYRG
LTDKKGRIKVFPPAIMKPQRLWTGKQVVSTLLINIIPENHVPLNLTGKAKIGGRAWVKGP
ANRCLNLDSMCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGKTSGKVLTCLG
RLFTAYLQLYRGFTMGIEDILVKPEADHKRKKIIEKSRRHGIEAVRAALNLPETASCEEV
QGKWQDAHLCKDQRDFNMVDMKFKEEVNSYNNEVNKVCMPLGLHRSFPDNNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEVLARIESRQANQQFKAIKKWRVRHQNS
VQREGGFLLFSQKKMASVKAQIPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKC
PDPSLGVWRPDTYFASVSETFENGVEEYINKWESENRLSYMCPVLSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTP
MMSVPVFNTKKALKKVKQLKKRLTRVCLAEVLQKVEIEESLHVKCKQNKHRLYKIKFHFL
PHEYYQEEKCVKPRQILHFMETRFFKILLERIKRKSAKMASFTEVSSRKATQKDLDGDHD
KTLNGQEAAGEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEEIGEENIDENVED
EEAESDKEERTSGAEEDQNGADGDESQHLSFMSQTKKEKDQLHQSAELRVNAVLDSHPSI
QNYTFDMENELWCEVSLTLPLMKVYFDLSSLLVFLARSTVIHEVKGITRCLLNESTNKQG
EKELVLHTEGINLVELFRYSDILDMNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIMVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccgaaagtggtgccatggcggcggctggcgggggtctccttcgggatgtac
acggccgaggagatcaggaaactgagtgtaaaacccataacaaatcctcagtatttggat
aatgtggggaatccagccactaatgggctctacgacttggctttgggacctccagactct
agagaagtgtgtgcaacttgtgtacagaacttcagcaactgtcctggtcattttggccac
atagaactgcctctgactgtctacaaccctctgttttttgataaattataccttctgatt
cgaggttcttgtttaaattgtcacatgctgacatgtactcgagctgtggttcacttactg
ctcagtcagcttaaggttctggagaaagggttgcttcatgctgtccatgatcttgaagtc
attctgaacaggtttttagagcaatgtgcagatgccacaggttcagaaattgaagaagag
ttaaatcaccatgttcaggaaatattacaaagttaccagctaacagatcagtgttcaaat
gtcaaaaatgtgtgtgagtgtagaaataaactgatagcacagttctggaaagcacatatg
agttcaaagaaatgcccaaactgcaaatctaggagatcactagtgcgaaaagagcacaac
agcaagctgacagtaacctatccttctacagtgtatcgtaagtcaggagaggaaggcgtt
ctggatgagccactggctattgatgagagccagttagggaagagaggatacctgacacca
atgactgccaaggaatacatcctggctctgtggaagaatgaaggtttcttcttgcgttat
ctcttccctgggatggatccccatgacagttctggattcagtccagacatgtttttttta
gatctacttgtggttccaccttcaaggtatcgtcctgtaaatcgtgttggagaccgacta
tttacaaatggtcagactgtgaacttgcaggctgtcatgaaagatgctcaactgatacgg
aagctcctggttttcatggcaaaagaacaatgtcagccaataaaaattgcagaaaaaatc
caaacagaggcagaagagaataatgaacctctggaccattctgtcctgacaatgattcca
ggacagaccattgcagataagctgtacaatgcttggattcgtcttcagagccatgtcaac
gttgtatttgatagtgacatggacaaactaacgacagaaaaataccctggtattcgtcag
ctattagagaaaaaggaagggctgttccgcaagcacatgatgggaaagcgtgtggatttt
gctgctcgatcagtcatttgccctgatatgtacattggtactaacgagattggcattcct
atggtatttgctactaaactgacttatcctcagccagtcactccctggaatgtcaaagag
ctgagacaggctgtcataaatggcccaaaggttcaccctggggcctccatggtcattaat
gaggatggatctcgtacactgttgagtgcaagcagcctgacccagagggaagccttagct
aagcagctcctcactccttcttcaggtgcgccccaatcaggactgaagattgtatgtcga
catattaaaaatggagatgttcttttactgaaccgccagcccactcttcacagaccctcc
atccaagctcaccgggcccgaatcctgcctggagaaaaagtgctgaggcttcactatgcc
aactgtaaggcttacaatgctgattttgatggtgatgaaatgaatgcccattttccacag
agcgagctgggtagagcagaagcctacaccttagcctttactgatgaacagtacctggtt
ccaaaggatgggaagccacttccaggcttgatccaggatcacatgatttctggagtcagc
atgacaatccggggctgctttttcaccagagagcagtatatggaacttatttatcgagga
ctaacagacaaaaaaggaagaattaaagtctttcctcctgccattatgaaaccacagcga
ttatggacaggaaaacaggttgtttctacattgttaataaacatcattccagaaaaccat
gtcccactgaatttgactgggaaagctaagattggtggaagagcctgggtaaagggacct
gcaaacagatgtctgaatcttgattcaatgtgtgaatcgcaggttattattagaaatggg
gagttactgtgtggagtcttggacaaagctcacttcggcagctctgcctatggcctggtc
cactgttgctatgaaatctatgggggtaaaaccagtggaaaagtgctgacatgtctagga
cgcctctttactgcttatctgcaactgtacaggggatttacaatggggattgaagatatt
ttggttaaacccgaagcagaccacaaaagaaaaaaaatcattgaaaagtcacgccggcat
ggtattgaagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggaggtc
caagggaaatggcaggatgcccatctctgcaaagaccagagggattttaacatggttgat
atgaaattcaaggaggaagtaaacagttacaacaatgaagttaacaaggtttgtatgccc
cttggtctccacaggagctttccagataacaatttgcagttgatggtacagtcaggagcc
aaaggatccactgtaaatacaatgcagatttcttgcttgctgggccagattgagttggaa
ggtcgaagacccccactgatggcatctggcaaatcactgccatgtttccagccttatgat
ttttcccctagctcaggaggattcgtgacaggcagatttctcactgggatcaaaccttct
gaattcttctttcactgcatggctggcagggaaggtctcgtggatacagctgtcaaaacc
agccgttctgggtacctacaaaggtgtatcataaaacatttggaaggactggtagttcag
tatgatctgactgtacgagatagtgatggcagtgtggtgcagtttctgtatggagaagat
gggcttgatatccctaaaactcagttcttacaacctgagcagtttcctttcattgcagaa
aactatgaggtaatccagaagacaaaccatctggatgaagttttagcaaggatagagtct
cgccaagctaaccagcagttcaaagccatcaaaaagtggcgagtcaggcaccaaaactct
gtgcaaagagaaggtggttttctgttgttttcccaaaagaaaatggccagtgtaaaagca
cagattccaggtggagaaatcaaaaatggaagagatcctgctactttacagttattgaag
atgtggtatgaactagatgagaagaaacgacggaagtatctgaagaaaacaaataagtgt
cctgacccaagccttggtgtttggcgtccagatacttactttgcatctgtttcagaaaca
tttgaaaatggagttgaagaatatatcaacaaatgggaatcagagaacagactaagttat
atgtgcccagtgctttcttctgataggttaaaggatctgttgtatttaaagtggcagcga
tctctttgtgacccaggagaagctgtgggtctacttgcagctcagagtattggggaacct
tccacacagatgactctgaacaccttccactttgctggcagaggcgaaatgaatgtcaca
ttgggtattccaaggttgcgggagatattgatggtggccagtgcaaatattaaaacgcca
atgatgagtgttcctgtgttcaataccaagaaagctcttaagaaggtgaaacagcttaag
aaacggctcacaagagtgtgcttagctgaggtcttgcagaaagttgagatagaggaatcc
ctgcatgtgaagtgcaagcagaacaaacatcgcctctacaaaatcaaattccatttcttg
ccccatgaatattaccaagaggagaaatgtgtgaagcccaggcagatcttacacttcatg
gaaacaaggttctttaaaattttgctggaaagaattaaaaggaagagtgcaaagatggca
tcttttactgaagtcagcagccggaaggcaactcagaaagatctagatggtgaccatgac
aagacattgaatggtcaggaagctgcaggagaggaagaagagaacattgttgatgcagaa
gctgatgaaggggatggtgatgctaccgaagcaaaacggaggaagaatcaggaagaagag
gttgattatgagagtgaagaagagattggggaagaaaacattgatgagaatgtagaagat
gaagaggctgaatcggataaagaagaaaggacttctggtgctgaagaagatcagaatgga
gcagatggtgatgaatctcaacatctttcctttatgtctcagactaaaaaagagaaagat
caattacatcagtcagcagagttgcgagtaaatgctgttctggacagtcacccatcaata
cagaattacacatttgacatggaaaatgaactttggtgtgaggtttcattgacgcttcca
ttgatgaaggtgtactttgatctctcctcattgcttgtgtttcttgcacgaagcacagtc
attcatgaagtgaagggaatcacacgatgcttgttgaatgaaagtaccaataagcaagga
gagaaggaacttgttctacacactgaagggataaaccttgtggagctgttcagatactct
gatattttggacatgaacagactttattccaatgatattcatgccatggctaaaaattat
ggcattgagtctgccctgagggtgattataaaggaaataaaggatgtatttgctgtatat
ggaattatggtagaccctcggcacctttcacttgtggcagattacatgtgttttgaagga
ttttataaaccactgaatcgttttggaattcagtccaactcctcccctctgcaacagatg
acatttgaaaccagctacaaattcctgaaggaagcaacaatgatgggtgcccatgatgaa
ctgcgatccccttctgcatgcctagtggttggaaaagttgttaaaggagggactggtttg
tttgacctcaagcaaccccttacgtag
DBGET
integrated database retrieval system
