Athene cunicularia (burrowing owl): 113480452
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Entry
113480452 CDS
T05777
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113480452 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113480452 (CPSF2)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113480452 (CPSF2)
U7-dependent histone pre-mRNA processing factors
113480452 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
113480452
NCBI-ProteinID:
XP_026705059
LinkDB
All DBs
Position
5
AA seq
729 aa
AA seq
DB search
MKHFNPSFRLVLLKIKHLERKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEN
FSMDIIDSLRKHVHQVDAVLLSHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMY
DLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTI
WKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQL
LTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEF
SKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSR
DLFIQWCQDSKNSIILTYRTTPGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKE
KLKKEAAKKLEQSKEADIDSSDESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKK
SYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVP
TKCISATESMEIKRVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGEL
REDEDLEMQVDVPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQS
VFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRD
LLYEQYAIV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattttaatccctcattcagattagttctgttgaagattaaacacttggagagg
aaaatgacatcgattatcaagttgactacgctttcaggggtgcaggaggaatctgccctt
tgctatctgttgcaagtagatgagtttcgctttcttttggattgtggttgggatgaaaac
ttttctatggatattattgattctctgagaaaacatgtacaccaagttgatgctgttctt
ctttctcatcccgaccctctacaccttggtgctcttccatatgcagttggaaaaatgggg
ttgaattgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtat
gatctctaccagtcccgccataatactgaagatttcacgctctttacgttggatgatgta
gatgcagcctttgacaagatacaacagctgaagttttctcaaattgtgaacttgaaaggc
aaagggcatggtttgtcgatcacaccattgccagctgggcacatgataggaggcacaatt
tggaagattgtcaaggatggagaggaagaaattgtttatgccgttgatttcaaccacaag
agggagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgcttatt
acagattcatttaatgctacttatgtacaacccaggaggaagcaaagggatgaacagcta
ctgactaatgttttggagacattacgaggtgatggaaatgtactgatagccgtggataca
gcaggcagagttctggaacttgctcaacttcttgatcagatctggagaacaaaagatgca
ggattaggagtctactctctagcgcttctgaataatgtcagctacaatgtagtggagttc
tctaaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaagacaagaga
aacaatcctttccagttccgccatctctccttatgtcatagtctgtctgatctggctcga
gtgcctagtccgaaagttgttcttgccagtcaacctgacttagagtgtgggttttctaga
gatcttttcattcagtggtgccaggattccaaaaactctataattttaacttaccgcact
acacctggaacattagcacggttcctgattgataatccttctgaaaaagttatagatatt
gagttgagaaaacgtgtcaaattggaaggaaaagaacttgaagaatacctagaaaaggag
aagttaaaaaaagaagcagctaagaagttagaacagtctaaagaggcagatattgattcc
agtgatgagagtgatgctgaagaggatattgatcagccaactgtacataagaccaaacat
gatttgatgatgaaaggtgaaggaagccgaaaaggaagcttcttcaaacaggcaaagaaa
tcttatccaatgtttccagcacctgaagaaagaattaagtgggacgaatatggcgagatt
attaaacctgaggattttctagttccagagcttcaagcaacagaagaagaaaaaagcaaa
ttagaatctggtttgacaaatggagaagagcctatggaccaggatttatcagatgttcct
accaaatgtatttctgcaacagaatccatggaaataaaaagagtcaggttaaaagattct
cttgtcagctcccttcagttctgtaaagccaaggatgctgagctggcgtggatagatggt
gttctggacatgcgggtttcaaaagtggatactggagttattttggaagagggagagctg
agggaagatgaagacttagagatgcaagtggatgtgccttcctcagactctagtgttatt
gcacaacagaaggcaatgaaaagcctcttcggtgatgatgacaaggagatgtgtgaggaa
agtgagatcattcctactttggaacctctgccacctcatgaggttcttggacatcagtct
gtgtttatgaatgagccaagactgtctgacttcaagcaagttctcttgcgagaaggtata
caagctgagtttgtaggaggagtgcttgtatgcaacaatctggtggctgttcgcaggact
gaaacagggcgaattggattggaaggctgtctctgtcaggacttctataggataagagac
cttttatacgagcaatacgctattgtctaa
DBGET
integrated database retrieval system
