Athene cunicularia (burrowing owl): 113481108 Help Entry 113481108         CDS       T05777                                  Symbol IGHMBP2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism acun  Athene cunicularia (burrowing owl) Brite KEGG Orthology (KO) [BR:acun00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:acun03009]     113481108 (IGHMBP2)    03012 Translation factors [BR:acun03012]     113481108 (IGHMBP2) Enzymes [BR:acun01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      113481108 (IGHMBP2)     5.6.2.5  RNA 5'-3' helicase      113481108 (IGHMBP2) Ribosome biogenesis [BR:acun03009]  Eukaryotic type   Other ribosome biogenesis factors    113481108 (IGHMBP2) Translation factors [BR:acun03012]  Eukaryotic type   Initiation factors    Initiation associated factors     113481108 (IGHMBP2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 zf-AN1 Helicase_RecD Viral_helicase1 ResIII nSTAND3 DEAD SLFN-g3_helicase Flavi_DEAD AAA_16 UvrD-helicase AAA_22 IstB_IS21 AAA_25 ABC_tran VWA_2 AAA DAP3 DnaB_C T2SSE AAA_33 PhoH UvrD_C_2 cobW RL Motif Other DBs NCBI-GeneID:  113481108 NCBI-ProteinID:  XP_026706235 UniProt:  A0A663M1F9 LinkDB All DBs Position 5 AA seq 987 aa AA seqDB search MAAEAAERHLELLREEREAELAESRAWQESVSLKELQRRGVCLLKLQAASQRTGLYGRLL VTFQPRKHDSDAELPYNSFGPGDIVGLYDSAGQGDLLSSGIVTRITSKAVTVAFEESRDG LPSLHQEGSYRLLQLANDVTYNRLKKALNSLKQYHGGPASDLIDVLFFSSDPSAFSETKP LKLYNDTLDASQREAVSFSLAQRELAIIHGPPGTGKTTTLVEIILQAIQQGLKVLCCAPS NVAVDNLVERLAGHKARVLRLGHPARLLQPIQHHSLDAVLARGDSAEIVADIRKDIDQAL AKTKKAQDKGERSHFLSEIKVLRKELKEREEAAMAAALSHASVVLATNTGASSEGPLKLL PENHFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHTAAAKGLSLSLME RLTERYGEKVVRMLTVQYRMHQAIMQWASMEMYGGRLTAHPSVAQHLLKDLPGVTSTEET SIPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLAGLHIQALVEAGVKARDIAVVAPYNLQ VDMLREHLCHRYPELEVKSVDGFQGREKEAVILSFVRSNRRGEVGFLSEERRINVAVTRA RRHVAIICDTHTVTSQAFLKRLVDYFSGHGEVRTAFEYLDNLAPECYAQEGRGERQRGAK LPAAPGPKLQLPAGRKLKAAAAAEAACRKPEAHFSPSTSGPGSESPGTKDGAEKFKAVLA AFLESDEVQLDFPPSLSSHDRMLVHLTAEDYRLQHWSTGEGRDRFVSVRKKEPAEPSRPT ATLPSQQLPIPQPQRPSGETPSPAEPGGSSEGSGKLDLKTLHLERVRREEARREEAAKKA QELSTGLPCSSRKKDKTEAKGKAAVKSGADSVAEEDIDALISAAVKADTTCSFPRCKASV TTLGQLCLHCNSRYCLSHHIPEVHGCGAKAKAHARQRISREGVLYPGSGSKDKSLDPARR AQLQRRLDKKLNELTSQRKSKKRDKEK NT seq 2964 nt NT seq  +upstreamnt  +downstreamnt atggcggcggaggcggcggagcggcacctggagctgctgcgggaggagcgggaggccgag ctcgccgagagcagggcatggcaggaaagtgtctccctgaaggagctgcagcgcagaggt gtctgcttgctgaaactccaagctgccagccagagaaccggcctctacggacggctgctt gtgaccttccagcctaggaaacatgattcagatgctgagctgccctataacagctttggc cctggggacatcgtgggcctttatgattcagctgggcagggtgatctgctctccagtggc atcgtaacacgcatcacctccaaagcagtgactgttgcctttgaggagtctcgggatggg ctgccgagtctgcaccaggagggctcttaccgcctgctccaactcgccaacgacgtcacc tacaacaggctgaaaaaagctctaaattcactgaagcagtatcacggtggtccagcctct gacctgatcgacgtcctcttcttttcttctgatccaagtgcattcagtgaaacaaagccc ctgaagctttacaacgacacgctggatgcatcacagagggaggccgtctccttctccctg gcacagagggagcttgccatcatccacgggcctcctggcacagggaagaccacaacccta gtagagatcatcctgcaagctatacagcaaggcctgaaagtcctgtgctgtgccccttcc aacgtcgctgtggataacctggtggaaaggctggctggccacaaggcccgcgtcctgcgg ttgggccaccctgctcgcctgctgcagcccatccagcaccactccctggacgccgtctta gcccgtggtgacagcgctgagatagtggcagatatcaggaaggacatcgaccaggccttg gcgaaaaccaaaaaggctcaagacaagggagagcggagccattttctcagtgagattaag gtgctgagaaaggagctgaaggaacgtgaagaagctgccatggctgcagcccttagccat gccagtgttgtccttgctacgaatacaggtgcttcctctgagggcccactgaagctgctt cctgaaaatcactttgatctggtggtgatagacgagtgtgcacaggccctggaagccagt tgctggatccctctgctgaaggctccaaagtgcatcctggccggggatcacaaacagctt ccccccaccatcatctctcacacggccgctgccaagggcctctcgctcagcctgatggag cgtctcactgagcggtacggcgagaaggttgtgaggatgctgacagtgcagtaccgaatg caccaggccatcatgcagtgggcttccatggagatgtacggcggccggctcactgctcac ccttcagtcgcccagcatttgctcaaggacctgccgggtgtcacctctacagaagagacc tcaattcccttattgcttatagacactgctggctgtggcctgtttgagctggaagtggaa gatgaacagtctaaggggaatccaggggaggtgcagctggctggtttgcacatccaggcc ttggtggaagctggtgtgaaggcaagagacatcgctgttgtggccccctacaacctccag gtggacatgctaagagagcacctttgccacaggtacccagagctggaagttaagtcagtg gatggtttccagggaagggagaaggaggcagtgatcctgtcatttgtcagatccaacagg agaggtgaggtgggctttctgtcggaagagcggaggataaacgtggcggtgacccgcgcc cggcgccatgtggccatcatctgtgacacccacaccgtcacctcccaggcctttctgaag cggctggtggattatttcagtgggcacggggaggtgcgcacagccttcgagtacctcgac aacctcgcgcccgaatgctatgctcaggagggccgtggtgagcggcagcgaggggcaaag ctccctgcagcacctggccccaaactgcagctgccggcggggaggaagctcaaagcagca gcagcggccgaagcagcgtgtcggaagccagaagcgcatttctctcccagcaccagtgga cctgggagtgagagcccagggacaaaagacggtgctgagaagttcaaggctgtgctggcg gccttcctggagagtgacgaggtgcagctggatttccccccgtccctcagttcccacgat cggatgctggttcacctgacggcggaggactacaggctgcagcactggagcactggggag ggccgggaccggttcgtcagcgttcgcaagaaagagcctgccgagccgtcgcgacccaca gccaccctccccagccagcagctccccattcctcagccacagcgtcccagcggagaaacc cccagccccgctgagccaggaggaagcagcgaaggctcagggaaactggacctgaaaacc ctgcacctggagagagtccggagggaggaagccagacgggaggaggcagccaagaaggct caggagctcagcaccggccttccatgcagcagcaggaaaaaagacaaaaccgaagccaaa ggaaaggcagcagttaagagtggggcagacagcgttgcagaagaggatatcgacgctctg atttctgctgccgttaaagctgacaccacctgcagcttcccccgctgcaaagccagtgta acaaccctgggacagctctgcctgcactgcaacagccgctactgcctcagccaccacatc ccggaggttcacggctgcggggccaaggccaaggcccacgcacggcagaggatcagcagg gagggggttctctaccctgggagcggctccaaagacaagtccctggacccggccaggaga gcccagctccagcggcgcctggacaagaagctcaacgaactgaccagccagagaaagagc aaaaagagagacaaggagaagtga

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