Athene cunicularia (burrowing owl): 113482120
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Entry
113482120 CDS
T05777
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun04622
RIG-I-like receptor signaling pathway
acun05164
Influenza A
acun05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113482120 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
113482120 (IFIH1)
05168 Herpes simplex virus 1 infection
113482120 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
acun04054
]
113482120 (IFIH1)
Enzymes [BR:
acun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113482120 (IFIH1)
Pattern recognition receptors [BR:
acun04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
113482120 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
DUF3638
Motif
Other DBs
NCBI-GeneID:
113482120
NCBI-ProteinID:
XP_026708268
LinkDB
All DBs
Position
7
AA seq
1010 aa
AA seq
DB search
MRGAFGQALPLPQAPPPAPGFPPGRVTNPLCGSGVTASLSAEEREKVRAAARHGGEVEGA
EELLRAVERGPRGCGWFHEFLQALQHGGCTLAACYVNPSLSQLPSPAEEADHDLCVHLVQ
LLHSTLVDRMQTMQVAEKCLEMGIFQDEDMDQIHTVTDNRGNREGARELLSRIVQKKDWF
SPFLIALRETQHGGLADDLCGNTGGTENRQNEVKNCTNEETEVASQPGYAVVEELKQHEN
VNDSFISENNVLETSVGKSSVVSESDVSIGDGSVSNLDENLGQSCTTSDTDEDEVESRAS
PEPDLILRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKKIASEPGKVIV
LVNKVPLVEQHLRKEFNPFLKRWYQVIGLSGDSQLKISFPEVLRRNDVIISTAQILENSL
LNAAKEDEEGVHLSDFSLIIIDECHHTQKEGVYNNIMRRYLKEKMKNRKLAKENKPLIPQ
PQILGLTASPGVGGATSYSKAEEHILKICANLDACRIMTVEEHASQLKNQVKEPYKKTVI
ADDERRDPFRERITEIMTSIQNYCQLHPKSEFGTQPYEQWVIREERKAAKEEKRKERVCA
EHLKKYNDALQINDTIRMVDAYNHLNNFYKEEKSKKMVRSDDDDDDEPAVSKHDETDEFL
IGLFHAKKKQLKELARKPEYENEKLIQLRNTLMEEFTKTEEPRGIIFTKTRLSAFALFQW
IKDNPKFEEVGIKAHYLIGAGHKSEIKPMTQNEQREVIDKFRGGNVNLLIATTVAEEGLD
IKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDVNIFREKMMYKA
IQRVQKMPQEEYLNKIHNFQLQSIVEKKMKAKRDQCKTYKKNPSLITFLCKNCHKLVCSG
EDIQVIEKMHHISVKKDFKSLYHTRENKTLQDKHADYQTNGEIICKDCGQAWGNMMVHRG
LDLPCLKIRNFVVVFEDKKTTKQIFKKWGELPIMFPSFDYAAHYPSSDED
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtgcgtttggccaggcgctgcctttgcctcaggccccgccacctgcccccggc
ttccctccgggacgagtaaccaaccctctgtgtggctccggcgttactgcctcgctgagc
gcggaggagagggagaaggtgcgggcggccgcccggcatgggggcgaggtggagggggcg
gaggagctgctgcgggccgtggagcggggcccccgcgggtgcggctggttccacgagttc
ctgcaggcgctgcagcacggcggctgcaccctggccgcctgctacgtgaaccccagcctc
agccagctgccctcgccggccgaggaggccgaccacgacctctgcgtgcacttggtgcag
ctgctccacagcacactggtggatagaatgcagaccatgcaggtggccgagaagtgccta
gagatgggcatcttccaggacgaggacatggatcagatccacactgttactgacaatcgt
gggaacagagagggtgcaagggagctattgagcagaatagtgcagaagaaagattggttc
tctccttttttgattgctttgcgtgaaacccaacatggaggccttgcagatgatttatgt
ggaaatacaggaggaacagagaatagacaaaatgaggtgaagaactgtacaaacgaagaa
acagaagttgcaagccaaccaggatatgctgtagtagaggagttgaaacagcatgaaaat
gtgaatgatagtttcatcagtgaaaacaatgtattggaaacatctgttggaaagagttct
gtagtttcagagtcagatgtctccataggagatggaagtgtcagtaacttggatgaaaac
ctgggacagagctgcacaaccagtgatacagatgaagatgaagtggagagcagagcttca
cctgagccagatctgatcctgagagattaccagatggaagttgcaaagccagcactgaat
ggggagaatattatcatatgtctccctacaggcagtggtaaaaccagagtggctgtttac
attaccaaagatcacttggataagaagaaaattgcatcagagcctggcaaagttatagta
cttgttaataaggtaccactggtagaacaacatttacgaaaggagtttaatccattcctg
aagcgttggtatcaggttattggtttaagtggtgattctcagctgaaaatctcatttcct
gaagttctcagaagaaatgatgtcatcatcagtacagcacagatccttgagaattcactg
ttaaatgcagccaaagaagacgaagaaggtgtccacctatcagatttttcacttatcatt
attgatgagtgtcatcacactcaaaaggaaggtgtctacaacaatataatgcgacgatac
ttaaaagaaaagatgaagaacaggaagctggcaaaagaaaacaaaccactgatcccgcag
cctcagattctgggacttacagcctcacctggtgtaggaggtgcaacatcctactcaaaa
gctgaagaacatattctgaaaatctgtgccaatctggatgcatgtagaatcatgactgtt
gaagagcatgcatcccagctgaagaatcaggtgaaggaaccatataagaagactgtgatt
gcagatgatgagagaagggatccatttagagagagaattactgagatcatgacaagcatt
caaaactattgccagctccatccaaaatctgagtttggaactcagccatatgaacagtgg
gtgatcagagaagagaggaaagctgcaaaagaagaaaaacgcaaggaacgtgtctgtgca
gagcacttgaagaaatacaatgatgctctccagataaatgacaccatccgaatggtggat
gcatacaatcacctaaataacttttataaggaggagaaaagtaagaagatggtaaggagt
gatgatgatgatgatgatgaaccagcagtatcaaaacatgatgaaacagatgaatttcta
ataggtttatttcatgcaaaaaagaaacagctgaaagagttggctagaaaaccagaatat
gaaaatgagaagttaatacagttgcgaaacactttaatggaggagttcacgaagactgaa
gaacctagaggaattattttcacaaagactcggctaagtgcttttgctctattccagtgg
attaaggataaccccaaatttgaagaagtgggaattaaggcccattatcttattggtgct
ggacataagagtgaaattaaacccatgactcagaatgagcaaagggaagttattgataaa
ttccgaggtggaaatgtaaatttacttattgctactactgtagctgaggaaggcctagac
atcaaagagtgtaacattgttattcgctatggccttgtcaccaatgaaattgctatggtg
caggctcgtggtcgagctcgagctgatgagagcacctatgcacttgtggcttcaagtggc
tcaggagctgttgaacgtgaagatgttaatattttccgtgagaaaatgatgtataaggcc
attcagcgtgtccagaagatgcctcaggaagagtatttaaataagattcacaatttccag
ttgcaaagtatagtagaaaaaaaaatgaaggcaaagagagatcagtgcaagacatacaag
aaaaatccttcactaataacattcttatgcaaaaattgccacaagctggtatgttctgga
gaagacatacaagttattgaaaagatgcatcatatcagtgtgaaaaaagacttcaaaagt
ctttaccatacaagagaaaataagacactgcaagataaacatgccgattaccagaccaat
ggagaaattatatgtaaagattgtggacaagcttggggaaatatgatggttcaccgaggt
cttgacctgccttgtctaaagattagaaattttgtggttgtgtttgaagacaagaaaaca
acaaagcaaatttttaagaaatggggagaactgcccatcatgttccctagttttgattat
gcagctcattatccttcaagtgatgaagattaa
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