Athene cunicularia (burrowing owl): 113482203
Help
Entry
113482203 CDS
T05777
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun04510
Focal adhesion
acun04512
ECM-receptor interaction
acun04518
Integrin signaling
acun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113482203 (COL6A3)
04518 Integrin signaling
113482203 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113482203 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113482203 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acun04147
]
113482203 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
acun00536
]
113482203 (COL6A3)
Exosome [BR:
acun04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113482203 (COL6A3)
Glycosaminoglycan binding proteins [BR:
acun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113482203 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
113482203 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
Ig_J
Motif
Other DBs
NCBI-GeneID:
113482203
NCBI-ProteinID:
XP_026708411
LinkDB
All DBs
Position
7
AA seq
2812 aa
AA seq
DB search
MRKHRHLPFVAMFCLLLSGLCLVHAQQQAVIEVNKKDIVFLIDGSTALGTAPFNSIRDFV
AKIVQRLEVGPDLIQVAVAQYADTVKPEFYFNTHQSRKDVMANVKRMKLMGGTALNTGSA
LDFVRNNFFTSAAGCRMEEGVLPMLVLITGGKSRDAVDQAAAEMKKNRIVILAIGSRNAD
LAELQEIAHERDFVFNPNDFRVQFMQAILPEVLSPIRTLSGGIIVPEPPSVQVTKRDIIF
LLDGSLNVGNANFPFVRDFVATLVNYLDVGTDKIRVGLVQFSDTPKTEFFLYSYQTKSDI
IQRMGQLRPKGGSVLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVTAGRSADPFLQV
SNELARAGVLTFAVGVRSADKAELEQIAFNPRMVYFMDDFSALAALPQELNKPITTYVSG
GVEEVPLAPTESKKDILFLIDGSANLLGSFPAVRDFIHKVISDLNVGPDATRVAVAQFSD
TIQVEFDFAELPSKQDMLLKVKRMKIKTGKQLNIGAALDEVIRRLFVAEAGSRIEEGVPQ
FLVLLAAGRSTDDVEQPSDALKQAGVVTFAIKAKNADPVELERIVYAPQFILNVDSLPRI
SELQPNIVNLLKTIQLQPAVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVQRVVESLDIG
RDKVRVAVAQYSNVIQPEFLLDTHEDKAELINAIQELKVMGGSPLNTGAALDYLIKNVFT
VSSGSRIAEGVPQFLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFL
PDFAISVPDFSQLDTVQQVVSNRVIRLTKKEIESLAPDLVFTPPSPVGVKRDVVFMVDGS
RYAAQEFYLIRDLIERIVNNLDVGFDTTRISVVQFSEHPHVEFLLNAHSSKDEVQSAVRR
LRPQGGQQVNVGEALEFVAKTIFTRPSGSRIEEDVPQFLIILSSRKSDDDLEYPSLQVKQ
VGVAPMVVAKNVDPEEMVQISLSPDYVFQVSSFQELPSLEQKLLTPIETLTGDQIRRLLG
DVQPPIDVSGDEKDIVFLIDSSDGVRPDGLAHIRDFISRIVQQLEVGPNKVRIGVVQFSN
NVFPEFYLKTHKSKNAVLQAIRRLRLRGGSPVNAGKALDYVVKNYFIKSAGSRIEDGVPQ
HLVVILGDRSQDDVNRPANVITSTAIKPLGVGARNVDRNQLQVITNDPERVLVVQDFTGL
PTLEKKVQSILEELPILTTETPGILVPVGKKQADIVFLLDGSINLGRDNFQEVLQFVYSV
VDAIYRDGDSIQVGLAQYNSDVTDEFFLKDYSTKPQILDAINKVIYKGGRVANTGAAIKH
IQAKHFVKEAGSRIDERVPQIAFIVTGGKSLDDAPSASLEITQKGVKVFAVGVKNIDLKE
VSRLASESAMSFRASTAQELSELNEQVLVTLEAAMEEKLCPGTTDVTRDCDLDVILGFDV
TDVGPGQNIFNSQRALESRVESVLNRITQMQKISCTGNQAPNVRVAIMAQARGGPVEGLD
FSEYQPELFERFQGMRSRGPYFLTADTLRSYMNKFRSSPSSSTKVIIHFTDGADDSIDQL
EAASFALHTEGVNALIFVGLDRVSNFDRVMQLEFGRGFTYNRPLRVNLLDLDFELAEQLD
NIAERTCCKVPCKCSGQRGDRGVPGPIGPKGATGDLGYGGYPGDEGGPGERGPPGVNGTQ
GFQGCPGHRGTKGSRGFPGEKGELGEMGLDGIDGEEGDKGLPGFSGEKGYSGRRGDKGTK
GERGERGDHGLRGDPGDSGADNTQRGSRGQKGEIGPMGEPGPAGLGGQGGGVGRKGMTGR
RGQIGIKGTKGSLGQPGPAGEQGMRGPQGPAGQLGTPGIRGEQGIPGPRAGGGIPGNPGE
RGRIGPLGRKGEPGNPGPKGANGQQGPRGEMGDDGRDGIGGTGPKGRKGERGFLGYPGPK
GGPGDRGSAGGPGPKGNRGRRGNSGEPGTPGQKGEAGYPGPSGLKGDKGESRDQCALVRN
IKDKCPCCYGPKECPVFPTELAFAIDTSSGVVRDVFNRMKQTVLRVVNNLTIAESNCPRG
ARVALVTYNNEVTTEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRA
RSGFLMRKVAVFFSNGDTRSSPQLNDAVLKLYDAGVMPVFLTSRQDPVLTRALEINNTAV
GHAIVLPTSGSQLNETIRRLLTCHICLDVCDPDPICGLGSGSQRPGFRDRRAAPTDVDTD
IAFIMDSSESTTPLQFSEMKKYISHLVSNLEISSEPKVSQHHARVAVLQQAPYEYETNSS
FPPVKTEFSLTDYGSKEKIINYLQNQMTQLHGTRAIGSAIEHTVAHIFGSAPNPRDLKVI
VLMMTGKVNKQELEYLQKVVTNAKCKGYFFVVLGIGRKVNAKNIYSLASEPNDVFFKLVD
KPGELHEEPLLRFGRLLPSFIRSDFAFYLSPEIRKQCEWFQSDQQAKSQRPGHTGHKAVY
VAPNTTVGRTLNASSTVSASMKPVASTSARARTTTASIMAQTRATDQTTASTVVQVNATI
QSAASTAGQAKTTGRTTANTTSAMAGGRKRQGARTHDIQITDVTENGARLRWASPEPHSA
YTFDITVTLAHDHSLVQKQNLTGTEHVIRGLRSGQKYLVVITGYQKSQPKVTYTGTFSTK
IPAQTKVSLANMMLNTEPLEGPEGDWPDPCLLDFDMGMQCKDYQIVWFFDYKNKICSQGW
YGGCSGNANRFEAEAECISKCLKPSAAEKAMQQPPLEKRLPSVTDICQLQKDEGTCRNFV
LKWYYDPETKSCARFWYGGCGGNENRFNTQKECEKVCVPGNINPGVVTTIGT
NT seq
8439 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacaccgacatttgccctttgtggcaatgttttgcctcctactctcaggactt
tgcttggttcatgcccagcagcaagcagttattgaagtgaacaagaaggatatagtcttc
ctgatagatggctcaactgctttggggactgccccctttaactcaattcgtgatttcgtt
gccaaaattgtccaaaggctggaggttggacctgacctgatccaagtggcggtggcacag
tacgcagacactgtgaagccagagttttatttcaacacccaccagagcagaaaggatgtg
atggctaatgtgaagagaatgaagctcatgggtggtacagcactcaacactggctcggca
ctggactttgtgaggaacaacttcttcaccagtgctgctgggtgcaggatggaggaaggg
gtgcttcccatgctggtgctcatcactggtggtaagtccagggatgccgttgaccaagct
gcggctgagatgaaaaagaaccggatagtgatcctggccattgggtcaagaaacgctgat
ctggcagaacttcaagaaattgcccatgagagagattttgtattcaatccaaatgacttc
cgtgttcagttcatgcaagccattcttcctgaagtgctgtcgcctatccggacactctct
ggaggaataattgtcccagaaccaccatcagttcaagtaaccaaaagggatatcatcttt
cttttggatggatcactcaacgttggaaatgccaacttcccctttgtgcgtgactttgtt
gccaccctagttaactaccttgatgtcggcactgacaaaatccgagttggcttagtgcaa
tttagtgacactcctaaaactgagttctttctatactcgtaccaaaccaaatcagacata
attcaacgaatggggcagctgaggcccaagggggggtcagtgctgaacactggctctgca
ctgaactttgtgctttcaaatcacttcacggaagctggtgggagcagaataaatgaacaa
gtgccacaggtcctagtcctggtgacggcagggaggtctgctgatcccttcttgcaagtt
tccaatgaattagctcgggccggagtgctgacttttgctgttggagttaggagtgcggat
aaggcagaacttgaacagattgcctttaatccaagaatggtatattttatggatgatttc
agtgctctggcagctttaccccaggagttaaataagcctataacaacatatgttagtgga
ggtgtggaagaggttccactcgccccaacagaaagcaagaaagatattttattcctgatt
gatggctcagccaaccttttgggtagctttcctgccgtccgggactttatacacaaagta
atttctgacctgaacgtgggtcccgatgccacacgagtagctgtagctcaattcagtgac
accatccaagttgaatttgactttgctgaactcccatctaagcaagacatgcttctcaaa
gtgaaaaggatgaagataaaaactgggaagcaactgaacattggagctgcgttagatgaa
gttataagaaggctgtttgtggcagaagctggaagcaggattgaagaaggggttcctcag
tttttggtccttctggctgctgggagatcaactgatgatgtggaacaaccgtcagatgct
ctgaaacaagctggagtggtgacctttgctatcaaagccaaaaatgctgaccccgtagag
ctggaaaggatcgtttatgccccgcaattcattctgaatgtcgactccctccctcggatt
tcagagcttcagccaaacatagtcaacctgttgaaaactatccagcttcagccggcagta
gttgagagaggtgagaagaaggatgtggtgtttctaatcgatggttcggatggagtcaga
agaggtttccctctgctgaagacctttgtccaaagagttgtcgaaagcctggatattggt
cgtgacaaggtccgtgttgccgtcgcacagtacagcaacgtcatacaacctgagttctta
ctcgacacccacgaagacaaagcagaacttatcaatgccatccaggagctgaaggttatg
ggaggatctcctctgaacactggagcagccctcgactatctcatcaagaacgtgttcaca
gtgtcaagcggcagcaggatagcggagggtgtcccgcagttcctgattctgctgactgct
gaccggtcccaggatgatgtgaggaggccctcagtggtcctgaagactagtggcacggtg
ccatttggcattgggattggaaatgctgaccttacagagctgcagacaatttccttcctc
ccagattttgctatctctgtgcctgacttcagccagctggatactgtgcagcaggtcgtc
tcaaacagagtcatccggctgaccaagaaagagatagagtcacttgcccccgatctggtt
tttacaccacccagcccagtgggtgtgaagagggatgttgtgttcatggttgatggctcc
cgctatgcagctcaggagttctacctcatccgtgatctcattgagaggatagtgaacaac
ctggacgtgggctttgacaccaccaggatttcagtggtccaattcagtgagcatccccac
gtggagttcctgcttaatgctcattccagcaaggatgaggtgcagagtgccgtgagacgg
ctgcggccccagggtggccagcaggtgaatgtgggggaggccctcgagtttgtggcaaag
accatcttcacccggccctctgggagccgcatagaggaggacgtccctcagttcttgata
atcctctcctcccgcaagtccgacgatgacttagagtacccatcactccaagtcaaacaa
gtgggagtggcacctatggtggtagcaaagaacgtggatcctgaggagatggtacagatt
tcccttagtcctgattatgtatttcaagtctccagcttccaggaactgcccagcctcgag
cagaagctgctgactcctattgaaacccttactggggaccaaatcagacggctgctggga
gatgtgcaaccccccatagatgtttctggtgatgaaaaggacatagtcttcctcattgac
agctctgacggtgttaggcctgatgggcttgctcacattcgagatttcatcagcagaatt
gttcagcagctggaagttgggccaaacaaagtgcgaattggtgtggtgcagttcagcaat
aatgtcttccctgagttctacctgaagacccacaagtccaaaaatgctgtcctgcaagcc
atccgccgcttgaggcttagaggagggtcccctgtgaacgctggcaaagccctagactat
gtggtgaagaactacttcatcaaatccgcagggagcaggatagaagatggagtgcctcag
cacctagtcgtcattctcggagaccggtcccaggacgatgtgaacagacctgctaacgtg
atcacttcaacagccattaaacctctgggtgtcggggccaggaacgtggacaggaaccag
ctgcaggtcattaccaatgatcctgagcgtgtccttgtggtacaggacttcaccggactc
ccaactttagaaaagaaggtgcagagtattcttgaagagcttccgatactcacaacagaa
acccctggaattttagtacctgtaggtaaaaagcaggctgacattgtgtttttgctggat
ggctccatcaatttggggagagataacttccaagaagttctccagtttgtctactctgtg
gtagatgccatttatagggatggagactccatccaggtaggactggctcagtacaactca
gatgtcactgatgagtttttcctcaaggactactccaccaaacctcagattttagatgcc
atcaacaaagtcatctacaaaggtggccgagtggcaaacactggcgcggccatcaagcat
atccaggcaaaacactttgtgaaagaggctggcagccgaattgatgagagggtgccccag
attgccttcattgtcacgggcgggaagtccttggatgatgcgccaagtgcctccttggaa
atcacacagaaaggcgtcaaggtattcgcggtcggtgtgaaaaacatcgacctgaaggaa
gtcagcagattggccagtgagagcgccatgagtttcagagcatccacagcccaggagctg
tctgagttgaacgagcaggtcctggttacgctggaggctgctatggaggagaaattgtgc
ccaggaacgacggacgttacaagagattgtgacttagatgtgatacttggctttgatgtc
acagatgtggggccaggccaaaatatattcaattcccagagagctctggagtccagagtc
gagtctgtgctgaacagaataacacagatgcaaaagatcagctgcactggcaaccaagcg
cccaatgtcagggtagccatcatggcccaggctcgggggggacctgtggagggactggac
ttctccgagtaccagcctgagctctttgagaggtttcagggcatgcgcagccgtgggccc
tatttcctcacggcggatacactgaggtcctacatgaacaaattcagatcctcgccctcc
agcagcaccaaggtcataatccattttactgatggtgcagatgactccatagatcagctg
gaggctgcttcatttgctttgcatacagaaggtgtcaatgctctcatctttgtggggctg
gaccgagtgagcaattttgacagagtgatgcagctggagtttggtcgtgggtttacctat
aacagaccgctcagagttaatctgctggatttggatttcgagctggcagagcagcttgac
aacatcgcagagagaacatgctgcaaggtgccatgcaagtgctcagggcagagaggggac
agaggtgtgccaggtcccatagggccaaagggcgccacgggtgatcttggctatggaggc
tatcctggtgatgaaggaggaccgggtgagcgtggaccacctggtgtgaacgggacacag
ggtttccagggatgccctgggcacagaggaaccaagggttcacggggattcccaggagag
aagggtgaacttggagaaatgggtctggatggcattgatggagaagagggagacaagggt
ttgcctggcttctctggagagaagggatactctggcagaaggggtgataagggaactaaa
ggcgaacgaggagagcgaggtgaccatgggctccgtggagacccgggagattcaggagct
gataatactcaacggggatccagaggccaaaagggtgaaattggaccaatgggagaaccg
ggaccggcggggctgggcggccaaggcggtggagtcgggaggaagggtatgacaggacga
aggggacagataggaattaagggtaccaagggctcactcggtcaaccggggccagctgga
gaacaaggcatgagagggccacagggtccagccggccaacttggcacaccaggcataaga
ggagagcagggcattcctggacccagggctggtggtggaataccaggaaacccaggagag
cgaggcaggattggtcccctgggacgaaagggcgagcctggaaaccctggacccaaaggg
gcaaatggacagcagggcccccgaggagagatgggtgatgatggacgagatggaattggt
ggcacaggtcctaaaggcagaaagggagaacgtggcttcctaggctacccagggcccaag
ggtggacctggtgatcgtggtagtgctggaggtcctggccctaaaggaaacagaggccgc
agaggaaattcaggagaacctgggacacccggtcagaaaggagaggctggataccctgga
ccatctggacttaaaggtgacaaaggagaatccagagatcaatgtgcgctcgtgaggaac
atcaaagacaaatgcccttgctgctatggtcccaaagagtgtcctgtcttcccaactgag
ctggcctttgctattgacacctcctcgggcgttgtgagggatgttttcaacaggatgaag
caaacggtgctcagagtggtcaacaacttaaccattgctgaaagcaactgtcctcggggt
gcccgggtggctcttgtcacctacaacaacgaggtcaccacagagatccgctttgctgat
gccaggaagaaatcgagcctcctccagcagatccaaaacttccaggcgaccctgaccaca
aagccacgcagcctggagactgctatgtctttcgtggccaggaatacattcaagcgtgcc
cgaagtggcttccttatgaggaaggtggctgtctttttcagcaacggggacacgagatcc
tccccacagctcaacgatgccgtgctgaaactctacgatgctggggtcatgcctgtgttc
ctcaccagcaggcaggacccggttctcacaagagctctggagatcaacaacacagcagtc
ggacatgcaattgttcttccaaccagtggcagtcagctgaatgaaactatccggaggctc
ttgacttgtcacatttgtctggatgtgtgtgaccctgatcccatctgtggtcttggtagt
ggtagtcagagacctggtttcagagacagaagggcagcaccaacagatgtagacactgac
atagccttcatcatggacagctcagagtccaccactcctctgcagttcagcgagatgaag
aagtacatttcccaccttgtaagtaacctggaaatcagctctgagccaaaagtatctcag
caccatgcaagagtggcagttctccagcaagctccttatgaatatgaaaccaactcaagc
ttcccaccagtaaaaactgagttttcactaactgattatggatccaaagagaagataatt
aactaccttcagaaccaaatgacccagctccatggcacaagggctataggaagtgcaatt
gaacacacagtggctcatatttttggaagtgcaccaaaccctcgggatctgaaagttata
gttctgatgatgaccggaaaagtgaataaacaggaacttgagtacctgcagaaggttgtt
accaatgcaaaatgcaaagggtacttctttgttgtcctgggcattggcaggaaggtgaat
gccaagaatatctatagcctagctagtgagccaaatgatgtgttcttcaaattggttgat
aaaccaggagagcttcatgaagagcccttgctgcgctttgggagactgctgccatctttt
atcagaagcgactttgctttctacctgtctccagagataaggaaacaatgtgagtggttc
cagagtgatcagcaagccaagagccagaggcccgggcacaccggacacaaagcagtgtac
gtggcacccaacacaaccgtaggccggaccctcaatgccagcagcacggtcagtgcgagc
atgaagcctgttgcaagcaccagcgcccgtgccagaaccaccactgccagcatcatggcc
cagaccagagccaccgaccagaccacagccagcaccgtggtccaggtgaacgccaccata
cagagcgcagcaagcacagccggccaggccaaaaccaccggccgcacgactgcaaacacc
acgtctgccatggcaggtggcaggaaaagacaaggcgcaaggacccacgacatccagatc
acagatgtcactgagaacggcgccaggctgcgctgggccagccctgagccacacagcgcc
tacacctttgatatcaccgtcaccttagcgcatgaccactctctcgtgcagaagcaaaac
ctgactggcactgagcatgtcatccgaggactcagaagtggacagaaataccttgtcgtc
attaccggctaccagaaatcccaacccaaagtaacgtacacagggacattcagcacaaag
atcccggcgcagaccaaggtgtccctggccaacatgatgctcaacactgagccgctggaa
gggcccgagggtgattggccagacccttgcttgctggactttgacatgggcatgcagtgc
aaggactatcagattgtgtggttctttgactacaaaaacaagatctgcagccagggttgg
tatggtggctgcagtggtaatgccaatagatttgaggccgaagctgagtgcattagcaaa
tgcttaaaaccatcagcagctgagaaagccatgcagcagccaccccttgagaaaagactg
ccgtcagtcacggatatctgtcagttgcaaaaagatgaggggacctgcaggaactttgtg
ctgaaatggtactacgaccccgagaccaagagctgcgcccggttctggtacggcggctgc
ggaggcaacgagaacagatttaacacgcagaaagaatgtgaaaaagtttgcgtccctggt
aacatcaaccctggtgtggtgacgacgatagggacatag
DBGET
integrated database retrieval system
