Athene cunicularia (burrowing owl): 113482239
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Entry
113482239 CDS
T05777
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
acun
Athene cunicularia (burrowing owl)
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acun04147
]
113482239 (COL18A1)
00535 Proteoglycans [BR:
acun00535
]
113482239 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
acun00536
]
113482239 (COL18A1)
Exosome [BR:
acun04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113482239 (COL18A1)
Proteoglycans [BR:
acun00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
113482239 (COL18A1)
Glycosaminoglycan binding proteins [BR:
acun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113482239 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
113482239
NCBI-ProteinID:
XP_026708520
LinkDB
All DBs
Position
7
AA seq
1764 aa
AA seq
DB search
MAPPRLGFLLLLACCFSSSETQLLDWIWGSTKTMGSPAEPSKGTTAPELLTSEAAPTPST
SLGAWGSQVVGDITTPQPQDPDPGTTALVGEGTVAKTTEQWDRNAMGLVESTAQPSIAPP
HSTSPAPGQDVASSSTEDSQLLATGTTEDPQLQGTGTTEDPQLLRTGTTEDPQLLGTGNT
EDLQLLGTGTSTTAGTRVSLQRPAGPRPGSAPFPFSPGDSNREQVMSPQDPTAQPPRHRH
GASPTPQIPRHGTGHWGLALAGMNRSQSPPLPNRRAANGVDPPLASPPEFDLLTAATRLY
SSSGTGLTSFLPGLMLADGHCLPIPTHLPFCSVLGTDHFRLPNYLRHSSEVEIRAALHEW
EGLLESRCHRYVEWFLCLLLLPGCSASVPVTPPPCQGFCEAVRDLCWMHLAGGRLPLPCD
ALPEEDEGYSCVFINASAENLSHEVSLLELIGDPPPEEILKIYGPDNNPGYVFGPNANTG
QVARYHLPSPFYRDFSLLFHIQPTTPRAGVLFAITDSSQSIIYVGVKLSELRAGKQQIIF
YYTEPGSPSSYAAATFTVPTLLNQWTRFAISVEEDEVILYLDCEEHERVRFERSPDEMEL
EDGSGLFVAQAGGADPDKYQGVIADLKLQGDPQAAERQCEEEEDDAEVSGDFGSGAEGGH
QPLGKVRGVPGLVDAVPVTSPPVVAGSEPRSGGGSPQQAERTRVEETQQVSTGGTGPKGE
KGEKGERGLKGDSGTGGIMGSGSVKGDKGEKGELGIKGSAGFGYPGSKGQKGEPGEPGLP
GTLSRHADGSVVEQVTGPPGPPGKDGAPGRDGEPGDPGEDGKPGDMGPQGFPGTPGEPGL
KGEKGDPGMGPRGPPGPPGPPGPPGPYSKHDKLTFIDMEGSGFAGDLESLRGPRGPPGPP
GPPGVPGLPGEPGQFGMNRTDLPGPPGLPGRDGIPGPPGPVGPQGPPGRDGAAGQPGPKG
EQGDVGDLGLPGAPGPKGSKGETGPAGAPGEMGLAGLPGPIGPRGQPGPPGPPGPPGPGY
EAGFGDMEGSGLPFTAGSPGPPGPEGPQGVPGLPGVKGEVGSPGQPGLPGPKGDAGVPGM
DGRPGLEGFPGPQGPKGDRGSPGEKGERGQDGVGLPGPPGPPGPPGQVISVSSEDKSLAA
LPGPEGRPGHAGFPGPVGPKGDRGSSGPQGSPGLKGEKGEPGVIISPDGTVVTAKVKGEK
GEPGLRGPVGPSGPQGRAGMKGEIGFPGRPGRPGMNGLKGDKGDPVDVSSVLGLRGPPGP
PGPPGPPGPPGSIVYDSSNAFSDSSHPVLPAFPGFHQFPGQKGEKGDAGAPGPPGHFPYD
PSHFSANLRGDKGDAGPKGEKGEPGSTPLYGPSVSGLPGPPGPQGYPGLPGPKGDSIVGP
PGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQAISIPGPPGPPGPPGPPGTSGM
SLGLRTLPTYQVMLSAVHELPEGNLVFLTDRQELYVRLRGGFRRVLLEEHTLIPNSALDN
EVYDKPPSVHYAGPQPPLQPRGPLHPLRNHNPPPTARPWRGDEVVANQHRLPEQPLLHHQ
HELLNSYYIHHRPDPAPVAAHVHQDFQPALHLVALNAPLSGGMRGIRGADFQCFQQARQV
GLAGTFRAFLSSRLQDLYSIVRRADRATVPIVNLRDEVLFSNWEALFTGTGAPLRAGAHI
LSFDGRDVLRDAGWPQKSVWHGSDTKGRRLPESYCETWRTEEHAVTGQASSLGSGKLLEQ
VASSCQHAFIVLCIENSFMTAAKK
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggccccacctcgcctggggtttctgctcctcctggcttgctgcttctcctcctctgaa
acgcagcttctggactggatttggggcagcacaaagaccatgggaagtccagcggaaccc
agcaagggaaccacagcaccagaactgctcacctctgaggcagctcctacccccagcacg
tccttgggggcatggggtagccaggtggtgggagacatcaccaccccacagccccaggat
ccagatcctggcacaacagcactggtgggtgaggggactgtggccaaaaccaccgagcag
tgggaccggaatgccatggggctggtggagagcacggcacagccaagcatcgctcctccc
cacagcacgtcacctgctcctggccaggatgtggccagcagctccaccgaggactcacag
ctcctggcgacagggaccactgaggacccacagctccaggggacagggaccactgaggac
ccacagcttctgaggacagggaccactgaggacccacagctcctggggacggggaacact
gaagacctgcagctcctggggacggggacctctacaacagcggggacacgggtgtccttg
cagagaccagcaggtccccggccaggtagtgccccttttcctttctcaccaggtgacagt
aaccgtgagcaggtgatgtcgccccaagaccccacggcacaaccaccccgacaccgccac
ggagcatcgcccaccccacagatcccgcggcatggcactggccactgggggctggcgctg
gctggcatgaacaggagccagagcccacctttgcctaacaggagggcagctaatggtgtg
gatcctcctcttgccagtcctcccgaatttgatttactaaccgctgctacacgactctac
agtagtagcggcacagggctcacatccttcttacctggactgatgttggcagacggccat
tgcctgcccatcccaacacacctgcccttctgcagtgtgctaggcacagaccatttcaga
ttaccgaattacctccgccacagcagtgaggtggaaattcgggcagctttgcatgagtgg
gaggggctgcttgaatcgcggtgccatcgctacgtggagtggtttctctgcttgctcctg
ctccctgggtgtagcgcctctgtccctgtaacccccccgccatgccagggcttctgcgag
gccgtcagagacctgtgttggatgcacttggccggtgggcgcctgcctctgccttgtgat
gctctccctgaggaggatgaagggtattcttgtgtctttattaatgcttctgcagagaac
ctgagccatgaggtcagcctcctggagctgattggagatcccccaccggaggagatcctc
aaaatttatggccctgacaacaaccccggctatgtcttcggccccaatgccaacacaggc
caagtggccaggtaccacctgccaagccctttctaccgggacttttcccttctgttccac
atccagcctaccaccccccgggccggcgtgctctttgccatcacggactcctcacagagc
atcatctatgtgggcgtcaagctctcggagctgcgggcgggcaagcagcaaatcatcttc
tactacacggagccaggctcacccagctcatatgcagcagccaccttcactgtgcccacc
ttgctcaaccagtggacacgctttgccatcagcgtggaggaggatgaagtcatcctttac
ctggactgtgaggagcacgagcgggtccgctttgagcgctccccagatgagatggagttg
gaagatggctctgggctctttgttgctcaggctggaggagctgacccagataaataccag
ggggtgattgctgacttgaagcttcaaggggacccgcaggcggccgagcgccagtgtgag
gaagaggaggatgatgctgaggtctctggcgatttcggcagcggggcagaaggtggacac
caacccttgggcaaagtcaggggtgttccggggctggtggatgccgtccctgtcacctct
ccccctgtggtggcgggcagcgagccaaggagtggtgggggttccccacagcaagctgaa
aggaccagagtggaggagacacagcaggtctccacaggaggcactggacccaaaggtgaa
aaaggggagaagggtgaacgtggcctgaaaggggactcggggactggtggcatcatgggt
tcgggcagtgtcaagggtgacaagggggagaaaggagagctgggcattaagggcagcgct
ggatttggctacccaggctccaagggccagaaaggggaaccaggtgaacccggccttccc
gggaccctctcacggcatgctgatggctcggtggtggagcaggtcaccggtcccccaggg
ccaccggggaaggatggagcccctggcagggatggcgagcctggtgatcctggcgaggac
ggcaaacctggtgatatggggccccaggggttccccgggacaccaggggagcccggtctg
aagggggagaagggtgacccaggcatgggaccaaggggaccccccggaccacctggcccc
ccaggaccaccaggaccctattccaagcatgacaagctgaccttcattgacatggagggc
tctggctttgccggtgacctggagagcctgcggggtccgcgagggccacctggtccccca
gggccacccggcgtgcctggtttgccgggagagccaggacagtttgggatgaaccgcaca
gacctgccaggacccccagggctgccaggcagggatgggatccctggacccccagggcca
gtgggtcctcagggtcctcctggaagagatggggcagctgggcagccagggcccaaagga
gaacagggcgacgtgggtgaccttggcctccccggtgcaccaggacccaagggcagcaag
ggagaaacgggaccagcaggagccccgggagaaatgggcttagctggccttcctgggccc
atcggacctcgtgggcagccgggaccccctggtcccccgggaccaccggggccaggctat
gaggctggatttggtgacatggagggctcggggctgccattcactgctggctcccctgga
ccacccggacctgaaggaccacagggggtgccgggactgccaggggtgaagggggaagtc
ggcagccctgggcagcctggcttgccaggaccaaagggagatgctggtgtgcctggcatg
gacggccgccctggcctggagggcttccccggaccgcagggacccaaaggtgacagaggc
agccccggcgagaagggtgagcgaggccaagatggtgtgggactgcctggcccccctggt
ccacctggtccccccggacaggtcatttctgtctccagcgaagataagtctttggcagct
ttgcctggtcccgaaggcagaccgggtcatgctggcttcccgggcccagtgggaccaaaa
ggagaccggggatcatctggtccccagggctcgccagggttgaagggggagaagggggag
cccggtgtcatcatcagccctgatgggaccgtggtcactgcaaaggtgaaaggagaaaag
ggggagccggggctgcggggaccagtgggaccctcgggtccccagggacgagcagggatg
aagggagagatcggctttccaggcagacccggacgtcctggtatgaatgggctgaaggga
gacaagggtgaccctgtggatgtcagtagcgtgctgggcttgcggggtcccccaggaccc
ccagggccccctgggccccctgggccacctggcagcatagtatacgacagcagcaatgcc
ttcagcgactccagccatcctgtgctgccagccttccctggtttccaccagtttccagga
caaaagggagagaaaggcgatgctggagccccaggacccccaggccacttcccctatgac
ccgagtcacttcagtgccaacctgcggggtgacaagggggatgcaggtcccaagggtgag
aagggtgagccgggcagcactccgctctacggtcccagcgtctctgggctgccagggcct
ccagggccccagggctaccccgggctgccgggtcccaagggggacagtattgttgggcca
ccagggcctcctggacctcagggcccccctggtatcggatatgaggggcggcagggccct
cctggccctcccggcccccctggtccaccctccttcccaggtccccacagacaagctatc
agcattcctggaccccctggaccaccgggaccccctggaccaccaggcaccagtgggatg
tccttggggctgcgcaccctgccaacgtaccaggtgatgctgagtgctgtgcatgagctg
cctgagggcaacctcgtcttcctgaccgaccggcaagagctctatgtccgactgcgtggg
ggtttccgacgagtgctgctggaggaacacactctgatccccaattcagctctggacaat
gaggtgtacgacaaaccacccagcgtccactatgctggcccccagcccccactccagccc
cgcggacccctccaccccctccgcaaccacaaccccccacccactgcccggccctggcgt
ggggatgaagtggtggccaaccagcatcgcctgcccgagcaacccctgcttcatcaccag
catgagctccttaatagctactacatccaccaccggccagatccagcccctgtggctgcc
cacgtgcaccaggacttccagcctgctcttcacctggtggccctgaacgctccgctaagt
ggtggaatgcgcggcattcggggtgccgatttccagtgcttccagcaagcccggcaggtc
gggctggctggcaccttccgtgccttcctctcctcccgcctgcaggacctctacagcatc
gtgcgcagggctgaccgtgccaccgtgcccatcgtcaacctccgggatgaagtgctcttc
agtaactgggaagcccttttcacgggcaccggagccccactgcgagccggtgcccacatc
ctctcctttgatggccgggatgtcctgcgggatgccggatggccgcagaagagtgtctgg
cacggctcagataccaagggccggcgcttgcccgaaagctactgcgagacgtggcggaca
gaggagcatgccgtcaccggccaggcttcctcactgggctctggcaagctgttggagcag
gtggccagcagctgccagcacgccttcatcgtcctctgcatcgagaacagcttcatgact
gccgccaaaaagtga
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