Athene cunicularia (burrowing owl): 113482258
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Entry
113482258 CDS
T05777
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun04510
Focal adhesion
acun04512
ECM-receptor interaction
acun04518
Integrin signaling
acun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113482258 (COL6A2)
04518 Integrin signaling
113482258 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113482258 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113482258 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acun04147
]
113482258 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
acun00536
]
113482258 (COL6A2)
Exosome [BR:
acun04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113482258 (COL6A2)
Glycosaminoglycan binding proteins [BR:
acun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113482258 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
113482258 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
113482258
NCBI-ProteinID:
XP_026708542
LinkDB
All DBs
Position
7
AA seq
1019 aa
AA seq
DB search
MFRQAFFSTLLCVALVPLQAQLDVDPGDVSPVSCAEKRNCPINVYFIIDTSESVALQTVP
IQSLVDQIKRFIPVFIDKLENELYQNQVYITWQFGGLHYSDVVEIYSPLTSSKDIYLPRL
SAINYLGRGTFTDCAISNMTEQIQTQMASGVNFAIVITDGHVTGSPCGGMKVQAERARDM
GIKLFAVAPSENVYEQGLREIANLPHELYRNNYAITQKDTLDIDVNTIDRIIQAMKHEAY
GECYKMSCLEITGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVP
GLKGEKGEIGSDGRRGAAGLAGRNGTDGQKGKLGRIGPPGCKGDPGDKGPDGYPGDAGDQ
GERGDEGIKGDPGRPGRSGPLGPPGEKGSPGLPGNPGPQGPPGSKGRKGETGPPGPKGEP
GRRGDPGTKGSKGTPGAKGERGDPGTEGPRGLPGEVGSKGARGDQGLPGPRGPSGAVGEP
GKIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGVRGEPG
PKGVQGTKGQKGEPGDPGPGGEPGLRGPTGETGLEGTPGPPGDPGLTDCDVMTYVRETCG
CCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSQTGARVGVV
QYSHEGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESKREKA
QVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQRV
QKMRLFSDLVAEEFIDKMEDVLCPDPQIVCPELPCQTELAVAQCTQRPVDVVFLLDGSER
IGEQNFHRAHHFVEDVARQLTLARTNSDNMNARIALLQYGSERDQDVVFPLTYNLTEISN
ALAQIKYLDSSSNIGSAIIHAINNIVLSPGDGQRLARRNAELSFVFITDGITGSKNLEEA
INSMKKQDVMPTVVALGSDVDMDVLLKLGLGDRAAIFREKDYDSLSQPSFFDRFIRWIC
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttccgacaagcctttttttccactctcctttgtgtggctttagttccgctccaagct
cagcttgatgtggatcctggagatgtcagtcctgtctcctgtgcagaaaagaggaactgc
cccatcaatgtgtacttcatcatcgacacctcagagagtgttgctctgcagactgtgcct
atccagagcctcgtggatcaaataaagcggttcatccctgtgttcatcgataaactggag
aatgagctctaccagaaccaagtctatatcacttggcagtttggtggacttcattactca
gatgtggtggaaatttacagccctttaacgagcagcaaagacatatacctccccaggctg
tctgccatcaactaccttggccggggcacctttacggactgcgctatctccaacatgaca
gagcagatccagacacagatggcctcgggtgtgaactttgcaatagtcatcaccgatggc
catgttactggcagcccctgcggggggatgaaggtgcaggctgagagggcgcgagacatg
gggatcaagctcttcgcagtggcccccagtgagaacgtctatgagcaggggctgcgggag
atcgccaacctgccacacgagctgtaccgcaacaactatgccatcacgcagaaggacacc
ctggacatcgatgtgaacaccatcgacaggataatccaagctatgaaacatgaagcctac
ggagagtgctacaagatgagctgcctggagattacaggtccacctggtcccaagggatac
cgagggcagaagggtgcaaaggggaacatgggtgagccaggctcccctgggctgaaggga
cgacagggtgacccaggtatcgaaggtccgatcggataccctggtcccaagggtgtccca
gggctgaaaggcgagaagggcgagattggatccgatggacggaggggtgccgctggtttg
gcaggcaggaatggcaccgatggacagaagggcaagctggggagaattggaccaccaggc
tgcaagggagaccctggtgacaagggccctgatggctacccaggagatgcaggagaccaa
ggtgaaagaggagatgaaggcataaagggagatcctggtcggcctggtcgcagtggaccc
ctaggacctccaggagaaaaaggaagcccgggacttccaggcaaccctggacctcaaggg
cctcctggaagtaagggaagaaaaggtgaaacgggacctcctggacccaaaggagagcct
ggtcgacgtggagatccagggacaaaaggcagcaaaggtactcctggagccaaaggagaa
agaggagatcctggtacagagggtcctcgtggcctgcccggtgaggttggaagcaaagga
gcaaggggagaccaaggactaccaggaccccgaggcccttcaggtgctgtaggagagcca
gggaagataggatcacgtggggaccctggtgacttgggcccaagaggtgacgctggacca
ccaggaccaaagggtgacagaggcagacctggctttagctatcctggacccagaggaccg
cagggtgacaagggtgagaagggtcaaccaggacccaagggagtaagaggtgaacctggg
ccaaaaggagtgcaagggaccaaaggacagaagggggaaccgggtgatcctggcccagga
ggggagcctggactccgtggtccaactggtgaaacaggtcttgaggggacccccggccca
ccaggagatcctggcctgactgactgcgacgtgatgacctacgtgcgagagacgtgcgga
tgctgtgactgtgagaagcgctgcggtgccctggacatcatgtttgtcatagatagctcg
gagagtattggctacaccaacttcaccctggagaaaaattttgttgtcaacgtggtcagc
cggctgggctctattgccaaggaccccaagtcacagacaggtgcccgtgttggggtggtg
cagtacagtcacgaagggaccttcgaagccatcaagcttgatgatgagcgcattgattca
ctgtcaagcttcaaagaagcagtaaaacgcctggagtggatcgctggaggcacctggaca
ccatctgcccttcagtttgcctacaacaagctcatcaaggaaagcaagcgagagaaagcc
caagtgtttgctgtggtgatcacagacgggcgctatgacccccgggatgatgacaaaaac
ctaggggctctttgcggtagagatgtggttgtcaacaccattggcattggagacatgttt
gatcagccagaacagagcgagaccctggtctccattgcctgcaatgaaccccagcgagtc
cagaagatgaggctcttctcagacctggtggcggaggaatttattgacaagatggaggat
gtgctctgcccagatccacagattgtctgtcctgagctgccctgtcagacagagctcgca
gtggcccagtgcacgcagcgccctgttgatgttgttttcttgcttgatggctctgaaagg
attggggagcagaatttccacagagcccaccactttgtggaggatgtggcccgacagctc
acgttggccaggaccaacagtgacaacatgaatgcccggattgcgctgctgcagtacggc
agtgagagggaccaggatgtggtcttcccactgacctacaacctgacggaaatttccaat
gccttggcacagatcaagtatctggactcatcctccaacatcgggtcagccatcatacat
gccatcaacaacatcgtgcttagcccgggagatgggcagcgactcgcccgtcgcaatgct
gagctctcctttgtctttatcactgacggcatcacaggaagcaagaacctcgaggaggcc
atcaactccatgaagaagcaagatgtcatgcccacagtagtggctctcgggagtgatgta
gacatggacgtcctgctgaagcttggcctcggggaccgggcggccatcttccgggagaag
gactatgacagcctctcccagcccagcttcttcgacaggttcattaggtggatatgttaa
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