Athene cunicularia (burrowing owl): 113482987
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Entry
113482987 CDS
T05777
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113482987 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acun03041
]
113482987 (PRPF38B)
Spliceosome [BR:
acun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113482987 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
113482987 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
113482987
NCBI-ProteinID:
XP_026709953
LinkDB
All DBs
Position
8
AA seq
537 aa
AA seq
DB search
GNCQGQQAAQHQPGAVPPAQQQLQSGAPKPAASGKQGNVLPLWGNEKTMNLNPMILTNIL
SSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVST
AFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFESFLDDEED
LDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKSRPRKIKKDGKEG
MEEVDRHTERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELERERERQRLERE
AKEREKERRRSRSTDRTLERRRSRSRDRYRSRSRSRDRKGDRRDRDREREKENERSRKKE
RDYDKERGSEREKDRSRERSKERKSKGDIEERRHKDDKDDKKHRDDKRDSKKERKHSRSR
SRERKHRSRSRSRNTGKRSRSRSKEKSSKHKNESKEKSNKRSRSRSRGRTDSVEKSRRRD
QSPSKEKSRKRSRSKERSHKHDHSDSKDHSDKHDRRRSQSTERESQEKQHKNKDETV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gggaactgccaggggcagcaggcggcccagcaccagcctggcgccgtcccgccggcccag
cagcagctgcagagcggagctcccaagccggcggcctcaggcaagcagggcaacgtgctg
ccgctgtgggggaacgagaagaccatgaacctgaaccccatgatcctcaccaatattctc
tcgtcgccctacttcaaagtgcagctctatgagctcaagacttatcatgaagtggtggac
gagatctacttcaaggttacacacgttgaaccatgggaaaaggggagcagaaaaacagca
ggccagacagggatgtgtggaggggtgcgtggtgttggaactggaggaattgtatctact
gccttttgtctgctctacaagttatttacactgaaactcactcgtaagcaagtgatgggc
cttataactcacacagactctccatatattagggctcttggatttatgtatattaggtac
acacaaccacctacagatctatgggactggtttgaatcctttcttgatgatgaagaggac
ctggatgtgaaggcaggtgggggttgtgttatgaccatcggggagatgcttcgttccttc
ctcactaagcttgaatggttttccacgttgtttccaagaattcctgtgccagtccagaaa
accattgaccagcaaattaaaagcagacctagaaaaataaagaaagatggcaaggaggga
atggaagaagtagatcggcatacagaacgtagacgttcaaggtctccaaggcgatccctc
agtcccaggaggtctcccaggagatccagaagcagaagtcatcatcgggaaggccatgga
tcttctagttttgatagagaactagaaagagaaagagaacgtcagagattagaacgtgaa
gctaaggagagagaaaaagaaaggcggagatctagaagtactgatcgcacactagaacgg
aggcgaagcagaagcagggacagatacagaagtcgtagtcgaagtcgtgacaggaaagga
gatagacgagacagggatagggagcgagagaaagaaaatgaacgtagccggaaaaaagag
agagattatgataaggaaagaggtagtgagagggaaaaagatagatctagagaaagatca
aaagaaaggaaaagtaagggtgatatagaagagagaagacacaaggatgacaaggatgat
aagaaacaccgggatgacaagagggattccaaaaaagagagaaaacatagtaggagtcga
agcagggaaagaaagcataggagtaggagccgaagtaggaacacaggtaagcgcagtaga
agcaggagcaaagagaaatcaagtaaacataaaaatgaaagtaaagagaagtcaaataaa
cgaagtagaagcagaagcagaggaagaacagatagtgttgagaagtccagaagacgagac
cagagtcccagcaaagaaaaatctagaaagcgtagcagaagcaaagaacgttcccacaaa
catgatcacagtgatagcaaggaccattcggacaaacacgatcgtcgaaggagccaaagt
acggaacgagagagccaagaaaagcaacataaaaacaaagatgagactgtgtga
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