KEGG   Athene cunicularia (burrowing owl): 113483169
Entry
113483169         CDS       T05777                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun03410  Base excision repair
acun04140  Autophagy - animal
acun04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:acun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113483169 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113483169 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    113483169 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:acun03036]
    113483169 (HMGB1)
   03400 DNA repair and recombination proteins [BR:acun03400]
    113483169 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:acun04147]
    113483169 (HMGB1)
Chromosome and associated proteins [BR:acun03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    113483169 (HMGB1)
DNA repair and recombination proteins [BR:acun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113483169 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     113483169 (HMGB1)
Exosome [BR:acun04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   113483169 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 RNA_pol_3_Rpc31 HMG_box_5
Other DBs
NCBI-GeneID: 113483169
NCBI-ProteinID: XP_026710281
UniProt: A0A663LY37
LinkDB
Position
1
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEDEEDEDDEEEEEEEDEDDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggtgatcctaagaagccgagaggtaaaatgtcttcatacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaacgatggaagactatgtcttctaaggagaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacca
cctaaaggtgaaacaaaaaagaagttcaaggatccaaatgcaccgaagaggcctccttcg
gcttttttcttgttttgctctgagtttcgtccaaaaatcaaaggagagcatcctggtctg
tctattggagatgtcgcaaagaaactgggagagatgtggaacaacaccgctgcagatgat
aaacagccttatgaaaaaaaggctgctaaactgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggaaaaaaagtagttgccaaggctgagaag
agcaagaagaagaaggaggaggaggaagatgaggatgaagatgaagaggatgaagatgat
gaagaggaggaagaggaggaggatgaagatgatgatgatgatgaataa

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