Athene cunicularia (burrowing owl): 113483169
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Entry
113483169 CDS
T05777
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03410
Base excision repair
acun04140
Autophagy - animal
acun04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113483169 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113483169 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
113483169 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acun03036
]
113483169 (HMGB1)
03400 DNA repair and recombination proteins [BR:
acun03400
]
113483169 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acun04147
]
113483169 (HMGB1)
Chromosome and associated proteins [BR:
acun03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
113483169 (HMGB1)
DNA repair and recombination proteins [BR:
acun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
113483169 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
113483169 (HMGB1)
Exosome [BR:
acun04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113483169 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
RNA_pol_3_Rpc31
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
113483169
NCBI-ProteinID:
XP_026710281
UniProt:
A0A663LY37
LinkDB
All DBs
Position
1
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEDEEDEDDEEEEEEEDEDDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggtgatcctaagaagccgagaggtaaaatgtcttcatacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaacgatggaagactatgtcttctaaggagaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacca
cctaaaggtgaaacaaaaaagaagttcaaggatccaaatgcaccgaagaggcctccttcg
gcttttttcttgttttgctctgagtttcgtccaaaaatcaaaggagagcatcctggtctg
tctattggagatgtcgcaaagaaactgggagagatgtggaacaacaccgctgcagatgat
aaacagccttatgaaaaaaaggctgctaaactgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggaaaaaaagtagttgccaaggctgagaag
agcaagaagaagaaggaggaggaggaagatgaggatgaagatgaagaggatgaagatgat
gaagaggaggaagaggaggaggatgaagatgatgatgatgatgaataa
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integrated database retrieval system