Athene cunicularia (burrowing owl): 113483293
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Entry
113483293 CDS
T05777
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun04382
Cornified envelope formation
acun04510
Focal adhesion
acun04512
ECM-receptor interaction
acun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113483293 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113483293 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113483293 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113483293 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acun04147
]
113483293 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
acun00536
]
113483293 (COL4A4)
Exosome [BR:
acun04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113483293 (COL4A4)
Glycosaminoglycan binding proteins [BR:
acun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113483293 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113483293
NCBI-ProteinID:
XP_026710542
LinkDB
All DBs
Position
9
AA seq
1681 aa
AA seq
DB search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NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcatttggacggattaagtggcttatcacaactgcctggtgg
ctgctggtttttttttcagcacaagaagttgatgggggagggtatgcgtatattgaccca
tgtgggggacaagattgttcattttgtcggtgctttccagaaaaaggatcaaggggtcag
cctggtgagctgggagctcaaggatggattgggtccttgggatctacaggaccagctggt
ctgccaggggaaaaaggagagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggccccactggagtcccaggatttcctggtttagatggtgttcctggatta
ccaggaagtgaaggacccaggggcaagcatggtttagatggctgcaatggctcaagagga
gatccaggatttccaggcgaaactggttatattggaccaagaggtccttatggaaatcca
gggcaaaaaggagaaaaaggaagtgcagtgtatgtgtcatattttgaaagaggacctcca
ggagacagaggtgatcctggaccccccggcatgcctggacctagagggtcaagaggtaca
acgggcccatctggatacccaggccaacctggcttgcctggtattccaggttaccctggc
ttgccaggtgaacagggaaatccaggtattggagtggatggacaaaagggggagccgggt
gatgttggacttcctgggccgcctgggtcaccactgttagttggacctcctggagctcag
ctgttcaaaggagaaaagggccaaaaaggactgcctggggtaacaggatacagagggcca
cgtggacccaaaggtatacttgggagaggagaaaagggtgaaaaaggcattcctggattc
cctggattgcggggtaatcctggttcttatggacatgcaggttttcctgggatgaagggg
gaaacaggatttgctggttttcctggacaacctggctatccgggcatacagggggatcca
ggagaaaaagggcccccaggtcctcccggaactgttggaactcctctgcttcctataaaa
ggtccacaaggagatcctggatttccaggtcctgctggtgatatggggtcagttggacca
gttggtcctgcaggcctgctaggaagaccaggagatgatggaacaagtctgcctggtctg
ccaggagtaagtggggcaccaggacctcaaggttttcaaggtgaccctggtttccctgga
acgggtgaatcaatcccaggaagacctggatttcctggaccaccaggcctacctggacag
ccaggaagacaaggcttacctggactacccagtataatctgtactgacagagggatccct
ggagaacctggagcaaaaggtcagataggccttccgggaagaaaaggtgaaaaaggagaa
aagggaaatcaaggcctctgctcatgtagtgctggtcctcctggtcgccgtggtttgcaa
ggacctccaggtgctcaaggaaagaaaggacaaatgggataccctggaagacatggagaa
aagggtgacccaggcttgtctggtgcaatgggatcaccagggctccctgggatacctggt
tctgctggacaacatggtgaaaaaggagagaaaggtgatccaggagcagttagaataaaa
ggaataaaaggtgaaagaggtcctagtggggttccaggatttccaggccaaagaggtaac
aatggcagagatggggaactaggattgcctggggaaaaaggagctgagggtgattctgga
gtaccactgccaggtgataaaggattccctggggttccaggacttcctggggtaaaagga
gagatgggattgcctggtttggggtttcctggccctccaggagcccgaggtagccctggg
gactttggtgatactggtaatgttgggccacctggcccaaagggccagaaaggtgagact
gtcttcattacattaccataccctggaagtccaggtccccccggttttaaaggtgttcaa
gggccaaagggttttaaaggactccccggtcatcctggactaaatggctttcatgggcaa
aaaggccatcgaggaaggccaggagcaggaatccctgggccagaaggctttcgaggcaaa
gctggtgatcctggtgatgaaggtgaaagagggtctacagttgatggtaaaaaaggccct
ccaggtccacctggcatagacggtcagaagggtgttccaggcgatactacatatggacct
ccaggaatcccaggcagcaggggactgccaggaccccctggtacacaaggagcaaggggt
gatccaggcattcctgggcttcgaggacagcctggtaccccaggatttccaggtgccaaa
ggttttagaggcccagaaggtgacacaggagcaccgggctgtccaggcttccctggttca
ccatgtgacacaggcttaccagggccaccaggactccgaggtgtcatgggcctgccagga
cctcaaggcttaccaggcttcaaaggtcagaggggagataggggcctagctgggccacct
ggaatcaaaggtctcaaaggctcttctggctcacaaggtcccccaggtcctccaggctcc
cgaggacatccgggacttccaggcaataaaggaccacctggtttcccaggagaaacagga
agcaaaggcattcaaggaccccaaggattcccaggactcccaggaacacaaggcccaatg
ggaatctctggcgtaaaaggtgaagaaggaaaagggggtccacctgggcctagtggagaa
tgtggggatacaggaataaaaggtgaaagagggcctccaggagacagtggctgcattaac
atccgtcttgagaaaggaaaaaaaggggaaccagggtttcctggtgagaacggatttaga
ggtgaaagaggtgaaaaaggcaatactggtttcagaggcatgccaggatttccagggagg
aatggtgtcccaggactgccaggtgaccatggtgacactggactgatgggctttccagga
tcacggggtttcccaggaccaaaaggctttgaaggaatcacaggttttcaaggacaacca
ggtgaccagggtgactttggcttaccaggaatccctggaaatccaggactgactggccta
aaaggatctaaaggcaagagaggcgacccaactcctctgcttggtacacgtggtcgaaaa
gggcctcccggagatccaggattaccagggctctgtggattcccaggagagaagggttcg
tcaggtatccaagggcaacctggaagaccaggatctaagggtgaccctgggtacccagga
atacctggatttccaggagctacaggttctcagggattgccaggagaacctggagaaaag
ggaagacatggaattttgggacctccaggattgcaagggttaactggatcccaaggcaga
aaaggtcttcctggactgcccggactggatggcttggacggactgaaaggtcaaaaaggt
tctacaggagctccaggtcaaagtgaaacagggcccccaggatacccaggagaactggga
ccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggcccccctgga
gaaaggggattcccaggattcccaggcagaagaggacctgttggacccactggacctatg
ggaagatatcctgatagcgcttctcctggtcctccaggtgatcaaggaccacctggttta
gatggcatcagaggtcagcctgggaatcctggtcctcctggagagactatctttgtgcga
ggagatccaggtgataccggtattcgaggggcaccaggtaatcctgggcagcgagggcaa
caaggagccagaggtcttccagggaatcaaggcagaggcggcccaaaaggtcctatggga
atccatggcccccagggtccacctggtgctacaggacaaccaggagaccaaggttttcaa
ggaaaacctggtcccagaggtcccacaggtttcataggtgaccctggtgaaccagggaaa
acagatgattcatgccctgcaatcccagggcctcctggagaagcaggacaaagaggagat
gatggctctgtaggactaccaggaccagtaggccaccctgggccccaaggaagaaaaggt
gaagaagggtcatgtggcctgccaggccaagatggcttacctggggcacttggaccacca
ggtgaccaagggattacaggagagcaaggatacgctgggccacaaggtccacctggccag
actggtatcccaggaccaccaggcccccatattagatctgcaagtggattcttgctcgtc
cttcacagtcagtcagacagagaaccactctgtccacaggggatgccaaaattatggact
ggctatagtctgctgtacctggaaggacaagagaaagctcacaatcaagatctcggtctg
gcaggatcttgtcttcctgtgtttagtaccatgccatttgcttactgtaatatcaaccaa
gtctgttactatgccagtcgaaacgataagtcttactggttgtcaagtgcggctccttta
ccaatgacaccactctccgaggaagaaatacaaccatatataagcagatgtgctgtatgt
gaggccccagcccaagcagtagcagttcacagccaagacgagtcgattcctccctgccca
gtgaactggaggagcctttggataggatattcctttttgatgcacactggatctggtgat
cagggtggtggacagtcccttatgtcacctggaagttgcctagaagacttcagatcagca
ccattcattgaatgccagggtcagcggggaacatgtcagttttttgctaatgaatacagt
ttctggctaacgactgtgatgcctgaattgcagttcgcatcagcgccgctgtcaggaact
cttaaagaaggacaagagcagaggagaaaaatcagtagatgccaggtgtgcctcaagcat
ggctaa
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integrated database retrieval system
