Athene cunicularia (burrowing owl): 113484567
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Entry
113484567 CDS
T05777
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113484567 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113484567 (EDC4)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113484567 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
113484567 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_Prp19
WDR55
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
113484567
NCBI-ProteinID:
XP_026712790
LinkDB
All DBs
Position
11
AA seq
1394 aa
AA seq
DB search
MDTVPSWSCFSLGSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSLAKPVHRSISLGALQ
EKQVICLSGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYG
NLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVADLAFAHLNSNQLACL
DEAGNLFVWRLAMDKEKIQEDILVNIKRPDNTPLNTSRRIIWCPFIPDDNEESGEEGSQT
LALLHEDRAEVWDLDIIRTNNSSWPVEVPNIKEGFIVVKGHSTCLSEGALSPDGTVLATA
SHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGAD
QNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVME
LMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLSVEGAQGA
GAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTSSSMPSHSSHEEFAFPDHMADLST
EGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSTSLQQIAVSP
GSSVSSLTAVTAMSSTSVTDASMPRAVVVYRPSEDLTVSPKMQLDTSLTLSSSSSSLQTS
PRSHSVLIPGLPDKLTPKAPLPVTPGNPSLALELQEVEPLVVPQASPTRERSPDVISSAS
TAISQDIPEIASETLQRSFAAAPSGLPTEVLEPSHHADSMASAASALHLLSPRNRHNSEH
SHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADSPRD
EVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKTSTQRLPVKD
WKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELMCMLRSQQRELSELRQN
QMELLQRLTDHLDAVQSSLMGHMERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQL
SQTLSTAVCNRLERTIREEMKKTVPQCISKSMDPITGQLSNTIAAKLTAVEGTLKESITK
LVKSKNLTDSIVRATADILQGPIQSAYREAFQSIVLPAFEKSCQSMFQQINDTFKQGTQE
YIQQLETHLKNKKVREQEARDPLLNQLRQLISTFQSTTEQLASTVTASVHAEVQHQLHII
VGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLDFQSQQTH
ILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLLSLIQQLSS
DLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPHNTLSKPARR
LMIMLQGLVTPGMT
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggatactgtgcccagctggtcatgcttttccctaggttcagtgaatgagaaccagaga
ccgtcaaattcgtataacggagacctgaatggactgctggtgcctgatcctattgtggcc
ggggatggaccttctctggctaagcctgtgcatcgcagcatttctttgggagctctgcag
gagaagcaagtcatctgcctttctggtgatgacagctccacttgtgtagtgatatcagca
aaagatgtggagatagtggccagcagtgattccagcatcaccagtaaggccagaggaagt
aacaaggtgaaaatacagcctgttgctagatatgactgggagcagaaatactactatggc
aatctgatagctgtttcaaactcttacctggcttatgccattagagctgccagcaatggc
tccgctatggtgcgggtgttgagcgtcagcactgctgagcggaccttgctgaaaggattc
acaggcggtgtggcagacctggcttttgctcatctcaactccaaccagctggcgtgcctg
gatgaagctggcaacctttttgtctggcgcctggccatggataaagaaaaaatccaagag
gacatcttggttaacatcaagcggcctgacaataccccattgaacacctctcgaagaatc
atctggtgccctttcatcccggatgataatgaggagagtggtgaagagggaagtcagaca
ttggcattattgcatgaggacagggcagaggtgtgggatttggacattatccgaacgaac
aacagctcctggccggtggaagtgcctaacatcaaagaaggcttcattgtagtgaaaggc
cacagcacgtgcctgagtgagggagcactttctccagatggaactgtgttggccacagca
agccatgatggttttgttaaattctggcagatctatattgaggggcaagacgagccaagg
tgtcttcatgagtggaaaccccatgatggtaggcctctttcctgcctgctcttctgtgac
aaccataaaaaacaagacccagaggttcccttctggagatttctcatcacgggagcagat
cagaatagagaactgaagatgtggtgcactgtgtcttggacctgtctgcagactgtccgc
ttttctcctgacatcttcagctccatgagtattcttcccagcctgaaagtctgcctggac
ctctccgctgagtatctgatactgagtgatgtgcagagaaaagtcttatatgtgatggag
ctgatgcagaaccaagaggaaggtaaagcttacttcagctccatctcagagttcctcctt
acccacccagtcctaagctttggcatccaggcagtgagccgctgtcggttaaggcacacc
gaagtgctccccgcagaagaggaaaatgacaacttaagtgtagaaggtgctcagggagct
ggtgctgttgaatcagcagcaggcgtgctgataaaactcttctgtgtgcacaccaaggcc
ctacaggatgtgcagattagattccagcctcttcatagtccagacacgagttcatccatg
ccttcccatagctctcacgaagaatttgcctttccagaccacatggctgatctaagcaca
gaagggctgggatctgaaaaaggatcagtgcatggctctcaaccagacctacggcgtatt
gctgatctgcctgtgccagcagacttcctttccctctcaaatgatgccaaacctaagctg
atgactccagatgcattcatgacaccaagtacatctcttcaacagattgctgtatctcca
ggcagcagtgtcagttccctgactgcagtcacagccatgagtagcacttctgtcacagat
gcctctatgcccagggctgtcgttgtttacaggccatcagaagacttgactgtgagcccc
aagatgcagctggacaccagcctcacgctgagtagcagtagcagcagtctccagactagt
cctaggagtcattccgttcttatcccaggcctccctgacaagctaacaccaaaggcacct
cttccagtcacgccaggaaacccctctctagcattggaactacaggaggtggagccctta
gtggtgccccaggcttctcccacccgcgagcgctcgccagatgtcatttcctctgcttcc
acagccatctcccaagatatcccagagattgcttccgagaccttgcaacgcagctttgca
gcagctccgtctgggctccctacggaggtgctggagcccagtcatcatgcagacagtatg
gcatctgctgcctcagccttgcatttgctgtctccaaggaaccggcacaattcagagcac
agccaccactctttggacatgcctccagtggaggtggacagactgaatgctccatcgtta
ctagagactgctttaactcaggaaaatgcatcttccgacagtgttgtgagtcagccttgg
ccagcagctcctgacataaccagagaaaccaggaacagcatggcagacagcccaagggat
gaggttgaagaaaagcacaagagctcttcctatcatcgacacagctaccacctgctgcag
catgacagccaggatgccagtgcagaacaaagtgaccatgatgatgaagttgcaagcttg
gcttctacgtcaggtggatttggtgccaaaacgtctacgcagaggctgcctgtgaaggac
tggaaagccaaggcatcccctcgggcttccccaaagctgaagcggaagggcaagaaagat
gatggggatgtgaaccagtcgccaagatcatctaacaaccaggtgacaccggagttccag
gatgagctgatgtgcatgttgaggagccaacagcgggagctctcggagctgcgtcagaac
cagatggagctgctgcagaggctcacggatcaccttgatgccgttcagagctcccttatg
ggccatatggagagggtgattgactcccagcaggagcaggagcagagaaggctagaccga
gccctgacggaaggacagcagcgcaatgggcagctccaggagcatttgtctcagcagctc
tctcagaccctgtccactgctgtgtgtaaccgtctggagaggaccattcgggaggagatg
aagaagactgtaccccagtgcatttccaagagcatggaccctatcactggccagctaagt
aacactattgctgccaagctcactgctgttgaggggacactgaaagagagtatcaccaag
ctagtgaaatcaaagaatcttacagatagtattgtgagggcaacggctgatatcctgcag
gggccgatccagtcagcttacagggaagcatttcagagcatcgtgttgccagcctttgag
aagagctgccagtccatgttccagcaaatcaatgacaccttcaagcagggcacacaagaa
tatatccaacagcttgaaactcacttgaaaaacaagaaagtacgagaacaggaggcccgg
gacccactgctgaatcagcttcgacagctcatcagcaccttccagagcaccaccgagcag
ctggcgtccactgtcacagccagtgtccatgctgaggtccagcatcagctgcacattatc
gtgggcaacatgcaggagtctattttggcccaggtgcagagagtcattaaaggtgaagtg
agcctggctatgaaggagcagcaagcagctgtcacctcaagcattgtccaggcaatgcgc
tcggcggccgggactccaatcccctctgctcacttggatttccagtcccagcaaactcac
atccttcagctgctgcagcagggacacctcaaccaagctttccagcaggctctgacagca
gctgatctcaacctggttctgtatgtctgtgagactgtggatactcagcaagtatttggg
cagcatccgtgcccgctgtcccagcccgtgctgctctctctcattcagcagctctcctca
gatttgggtactcgtacagaactgaagttgaattacctggaggaagcagtgatgcacctg
gaccacagtgaccccatcacccgcgaccacatggggtcagtcatgaaccaggtgcggcag
aagctcttccagttcctccaggtggaaccccacaacacactgagcaagcctgcccgtcgc
ctcatgatcatgctccagggcctggtcacccctggcatgacctag
DBGET
integrated database retrieval system
