Athene cunicularia (burrowing owl): 113485198
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Entry
113485198 CDS
T05777
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
acun
Athene cunicularia (burrowing owl)
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acun03000
]
113485198 (SOX30)
Transcription factors [BR:
acun03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113485198 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
113485198
NCBI-ProteinID:
XP_026714009
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Position
13
AA seq
622 aa
AA seq
DB search
PRWELLGPFSVLQVKVEEPEPEGGNSLGSHTDGGGSVGETRSSPSPRRGKGGARGAIKRE
RDDERVSGASQEEVKALKKRWNRKEPRRGGDVKGEPPNTAFEACRVKREKDYGPAGAQAS
TDDRTVQQRGGFGVSPGLLQNPVVLQPLPPGTRIQIQSPLPPEMIHAAKVPVGQVPLKRK
ALLEHPVKIETKNVPFTVLPSDSGMADAPFSKDRSGHVKRPMNAFMVWARIHRPALAKAN
PAASNTEISIQLGLEWSKLTEEQKQPYYDEAQKIKQKHTEEFPDWVYQPRPSKRKHFPLP
VFSSTSQSITGTNPAGVYPFPSPAYSVVIPSVKNSIGHPVCESPAIRLPASSIQHAVPVT
LLQTASASTTSVAVPAPTLPLHPVFSPQHFVKPAQTEALDVSKLNCSLKRPSPVFIESFS
RNPSNITTTNGRFSVPNSEPPKEYPGVSAFPRGVPLPQATPFLHSHFYKSPPIGQPASLF
GLPPRCSFYHPYFLPGPHYTPSSTCPFSRPPLLHLGRNFSRSAPGFYEDRYQRQEAMFST
LNRDYPFKEYQTESIRENHHSFECLDVVSCHDKCNEEQYLSPLSQPDAGALEEVLSAASS
PSSTHIINVTDSDEEEIKLQDL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
ccgcggtgggagctcttgggccccttcagcgtgctgcaagtcaaagtcgaggagcccgag
ccggaggggggaaactccctgggcagccacacggacggcggggggtcggtgggcgagacc
aggagctccccatctccgcggaggggtaaagggggggcccgcggcgccatcaagagggaa
agggacgatgaaagggtcagcggagcaagccaggaggaggtgaaggcgctgaagaagagg
tggaataggaaggagccccggagaggcggtgatgtcaaaggggagccgcctaacacggcc
ttcgaggcttgcagggtgaagagggaaaaggactatggcccggctggagctcaggccagc
actgatgaccgcacggtgcagcagcgcgggggctttggggtctcccccggattgctgcag
aacccagttgtgttgcagcccttaccgcctgggacccgcatacagatccaaagccctctg
ccgccagagatgatccacgcagctaaagtgccggtgggacaagtgccgcttaaaaggaag
gctttactggagcatccagtaaagattgaaactaaaaatgttcccttcacagtactgccc
tccgattcaggtatggcagatgctccatttagcaaggacagaagtggccacgtaaagcgt
ccaatgaacgcatttatggtgtgggctaggattcatcggcctgccctagcaaaagctaac
ccagctgccagtaatacagaaatcagtattcagcttggactggagtggagcaaactgact
gaagagcaaaagcagccctattatgatgaagcacagaaaataaaacaaaagcacacagag
gaatttcctgattgggtttatcaaccacgaccaagcaaaaggaagcattttccactgcct
gtcttttccagcacttctcagagtatcaccggtacaaatccagctggtgtttatcctttc
ccatcacctgcttactctgttgtcatccccagtgttaagaacagtattggacatccagtc
tgtgagtctcctgctatccgtctgccagcttcttccattcaacatgctgttccagttact
cttctccagacagctagtgcaagcaccacatcagtggctgtcccagctccaactctgccc
ctgcaccctgtgttttcaccacagcactttgttaaacctgctcagacagaagctcttgat
gtatctaagctcaattgctctctgaagagaccttcaccagttttcattgagagcttcagc
agaaacccaagtaacataaccaccactaatggcagattttctgtccctaatagtgagccc
ccaaaggagtacccaggggtttctgcttttcctagaggtgtacctcttccccaggctacc
ccttttcttcactcacatttctacaagtctcctcccattggtcagccagccagtctgttt
ggattgcctcctcggtgttcattctaccacccttactttttacctggacctcattatacc
ccctcaagcacatgcccgttcagccgacctccacttctccacctcggtaggaatttctcc
cgctcagcgcctggcttttatgaagacaggtaccaaagacaggaggcgatgttttcaact
ctgaacagagactatcctttcaaagaatatcaaacagaaagtatacgtgagaaccaccac
agctttgagtgccttgacgtagtgtcttgccacgacaaatgcaacgaggagcagtattta
agccccctatcacagccggatgctggagcattggaggaggttttgtcagctgcctcatct
ccctccagcacccacataatcaatgtaactgacagtgatgaggaagaaataaagctgcaa
gatttgtaa
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