Athene cunicularia (burrowing owl): 113485578
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Entry
113485578 CDS
T05777
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113485578 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113485578 (PARN)
Enzymes [BR:
acun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
113485578 (PARN)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113485578 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
T6PP_C
NCBP3
RRM_1
PTHB1_pf
Motif
Other DBs
NCBI-GeneID:
113485578
NCBI-ProteinID:
XP_026714624
UniProt:
A0A663N4P7
LinkDB
All DBs
Position
14
AA seq
577 aa
AA seq
DB search
MDFLLFQFGLCTFKYDHTEEKYIMKSFNFYIFPKPFNRSSPDVKFVCQSSSIDFLANQGF
DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGVGSLSYISPNATKCPVTIPEDQKKFI
EKVVEQIEDLLKNEENESLELEPCTGFQRKLIYQTLSWKYPKGIHVETLESDKKERYIAI
SKVNEEERKRREQQKQAKEQEELNDAVGFSRVVHAIANSGKLVIGHNMLLDVMHTIHQFY
CPLPDDLSEFKEVTSCVFPRLLDTKLMASTQPFKEIINNTSLAELEKRLKEVPFSPPKVE
SAEGFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPKNHVSARSKLIEPFFNK
LFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTSA
FVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVEKKHEEKQAKRKCTEDSWKEMERKRLKT
QCTPYVSQSRYYCVNSFTGTSMVGKRSMSPIQEETGSDDMEEGESQDPEYDQTESCAESL
PDGKKRSRKFKKIKTEQVPAGSLTTSSTGIFEVPETW
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttgctctttcagtttggcctttgcacttttaaatatgatcacacagaagaa
aagtatataatgaagtcatttaatttctatatttttccaaaaccctttaacagaagttca
ccagatgtcaagtttgtctgtcagagttcaagtatagattttttagcaaaccaaggattt
gattttaataaagtttttcgcaatgggattccatatttaaatcaggaagaagaaagacaa
ctaagggaacagtatgatgaaaaacgttctcaggccaatggtgtgggatctctgtcatac
atttctcctaatgccacaaagtgtcctgtaacaattcctgaagatcagaaaaaattcatt
gagaaagtagtggaacagatagaagacttattaaagaatgaagaaaacgaaagtttggaa
ctggagccatgtacaggatttcagaggaagttaatttatcagaccttgagttggaagtat
cctaaaggtatccatgttgaaactctggagtcagataagaaggagagatacattgctatt
agtaaggtaaatgaagaggaacgaaaaagaagagaacagcagaaacaggcaaaagaacag
gaagaattgaatgatgcagtaggattttccagagttgttcatgccattgctaattctggc
aagcttgttattgggcacaatatgctgctggatgttatgcataccatacatcagttctat
tgtcccctacctgatgacctgagcgagtttaaggaagtaacatcatgtgtctttccccgg
ctattggatactaaactgatggcaagtacacaaccttttaaggagatcattaataatacg
tcccttgcagaactggaaaagcgtttaaaagaggttccattcagccctcctaaagttgaa
agtgcagaagggtttccaagttatgatacagcttctgaacaacttcatgaagcaggatat
gatgcttacattactggattgtgcttcatctccatggctaatttcctaggttcattcctc
agtcctccgaaaaatcacgtgtctgctagatcaaaacttattgaacctttttttaacaag
ctatttcttatgagagtaatggacataccatatctcaatttggaaggaccagacttgcag
ccaaaacgagatcatgttcttcatgttacttttcctaaagagtggaagactagtgacctt
taccagcttttcagtgcctttggtaacattcaggtttcgtggattgacgatacatcagca
tttgtatcattgagccagccagaacaagtacaaatagctgtaaacaccagcaagtatgct
gaaagttacaggatccagacatacgcagaatatgttgagaaaaaacatgaagaaaaacag
gcaaagagaaaatgtacggaagatagttggaaggagatggagagaaagcggttaaaaact
cagtgcacgccttacgtttcccagagtcgatactactgtgttaacagttttacaggtacc
agtatggtgggaaagagaagcatgagtcctattcaggaagaaactggttctgatgatatg
gaagagggagaaagccaagatccagaatatgatcagactgagtcctgtgcagagtcactt
ccagatggtaagaagagatccagaaagttcaaaaagatcaagacagaacaagttccagca
ggaagcctcacaactagttccactggaatttttgaagtccctgaaacatggtag
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