Athene cunicularia (burrowing owl): 113486040
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Entry
113486040 CDS
T05777
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03082
ATP-dependent chromatin remodeling
acun03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113486040 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113486040 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acun01009
]
113486040 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acun03021
]
113486040 (SMARCB1)
03036 Chromosome and associated proteins [BR:
acun03036
]
113486040 (SMARCB1)
Protein phosphatases and associated proteins [BR:
acun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113486040 (SMARCB1)
Transcription machinery [BR:
acun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113486040 (SMARCB1)
SWI/SNF complex
113486040 (SMARCB1)
Chromosome and associated proteins [BR:
acun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113486040 (SMARCB1)
PBAF complex
113486040 (SMARCB1)
SWI/SNF complex
113486040 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
113486040
NCBI-ProteinID:
XP_026715446
UniProt:
A0A663MBV8
LinkDB
All DBs
Position
15
AA seq
349 aa
AA seq
DB search
MFRGSLYKRYPSLWRRLATVEERKKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEV
EEILDGNDEKYKAVSISTEPPTYLREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRM
GRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPE
MFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLV
DQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTV
EIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgttccggggttccctgtacaagagatatccctcactctggaggcgattagccacagtg
gaagaaaggaagaagatagtggcctcttcacatgaaaatcagcggtctcatagtcccaga
agatatcatggctatacaacgttagccactagcgtgacgctgttaaaggcttctgaagtg
gaagagatcttggatgggaatgatgagaagtataaggcagtgtctatcagcacagaacct
cctacctacctcagagaacagaaggcaaagaggaacaaccagtgggtgccaaccctgccc
aacagctctcaccacctggatgcagtgccatgctcaacaacaattaacagaaatcgcatg
ggcagggataagaagaggacattccctctgtgctttgatgaccatgacccagcagtgatc
catgagaatgcgtcccagccggaggttctggttccaatcaggcttgatatggaaattgat
gggcagaaactcagagatgcatttacgtggaacatgaatgaaaagctaatgaccccagaa
atgttctctgagattctttgtgatgacctggatttgaatcctctgacctttgtccctgct
attgcctctgccatccgacaacagatcgagtcatacccaactgacagtatcctagaagat
cagtcagaccaacgagttattattaagctaaacatccatgtagggaacatctcccttgta
gaccagttcgagtgggacatgtcggagaaggagaattcaccagagaagtttgccttgaag
ctgtgctcagagcttggcctgggtggggagtttgtcactactattgcctacagcatccgg
ggacagctgagttggcatcagaagacctacgccttcagcgagaaccctttgccgacggtg
gaaattgccattcgcaacacgggcgatgctgaccagtggtgccctctcctggaaaccctc
acagatgccgagatggagaagaagatcagagatcaggacagaaatacaaggcgcatgaga
cgtttggccaacactgctccagcctggtaa
DBGET
integrated database retrieval system
