KEGG   Athene cunicularia (burrowing owl): 113486184
Entry
113486184         CDS       T05777                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun03030  DNA replication
acun03410  Base excision repair
acun03420  Nucleotide excision repair
acun03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113486184 (RFC5)
   03410 Base excision repair
    113486184 (RFC5)
   03420 Nucleotide excision repair
    113486184 (RFC5)
   03430 Mismatch repair
    113486184 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acun03032]
    113486184 (RFC5)
   03036 Chromosome and associated proteins [BR:acun03036]
    113486184 (RFC5)
   03400 DNA repair and recombination proteins [BR:acun03400]
    113486184 (RFC5)
DNA replication proteins [BR:acun03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    113486184 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    113486184 (RFC5)
Chromosome and associated proteins [BR:acun03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    113486184 (RFC5)
DNA repair and recombination proteins [BR:acun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     113486184 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    113486184 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_24 Rad17 AAA_22 AAA_11 AAA_assoc_2 DEAD ResIII AAA_14 RuvB_N DUF815 AAA_30 AAA_5 AAA_19 PhoH DNAX_ATPase_lid TniB AAA_7 TIP49 ATPase_2 nSTAND3 AAA_25 Mg_chelatase Thioredoxin_6 Gp44_lid bpMoxR AAA_28 Hydantoinase_B
Other DBs
NCBI-GeneID: 113486184
NCBI-ProteinID: XP_026715708
LinkDB
Position
15
AA seq 326 aa
PVRSLRCRVEKYRPQALSELVSHRDILSTVQRFISEDRLPHLLLYGPPGTGKTSTILACA
RQLYREREFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMTQDA
QNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIREEG
VDVTEDGMKALVTLSSGDMRRALNILQSTAMAFGKVTEENVYTCTGHPLKSDISNILDWM
LNQDFSTAYRKIMELKTLKGLALQDILTEIHLFVHRVDFPPSVRIQLLIKMADIEYRLAA
GTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq 981 nt   +upstreamnt  +downstreamnt
ccggtgcgctctctccggtgcagggtggagaagtaccggccgcaggcgctgtcggagctg
gtgtctcaccgggatatcctcagcaccgtgcagcggttcatcagcgaggaccggctcccg
caccttctcctctatggccctcccggtaccggtaagacctcgaccatcctcgcctgtgcc
aggcagctctaccgggagcgggagtttggctccatggtgctggagctcaacgcctccgac
gaccggggtatcgacattgtgcgagggcccatcctgagcttcgccagcaccaggaccatc
tttaagaaaggcttcaagctcgtcatcctggatgaagcggacgccatgacccaggatgct
cagaacgccctgaggcgagtgatcgagaagttcacagaaaacacccgcttttgcctcatc
tgcaactacctctccaagatcatccccgccctgcagtcccgctgcacgcgcttccgcttc
ggccccctcaccccggagctgatggtgccccggctgcagcacgtcatacgggaggagggg
gtggatgtgactgaggatgggatgaaggctctggtgactctctcgagcggtgacatgcgc
agagcccttaatatcttgcagagcactgccatggccttcgggaaggtgacagaggagaat
gtctacacctgcacaggacaccccctcaagtctgacatctccaacatccttgactggatg
ctgaaccaggacttttccactgcctaccgcaaaatcatggagttgaagacgctgaagggc
ttggccctgcaggacatcctcactgagatccacctgtttgtgcatagagttgatttccca
ccctcagtccgcatccagttgctgatcaaaatggcagatatcgagtaccggctggctgct
gggaccagtgaaaagattcagctgagctccctcattgcggctttccaagtcaccagggac
ctgatcgtggccgaagcctga

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