Athene cunicularia (burrowing owl): 113486650
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Entry
113486650 CDS
T05777
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
acun
Athene cunicularia (burrowing owl)
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acun03021
]
113486650 (SETX)
Enzymes [BR:
acun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113486650 (SETX)
5.6.2.5 RNA 5'-3' helicase
113486650 (SETX)
Transcription machinery [BR:
acun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113486650 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
Viral_helicase1
AAA_30
AAA_22
UvrD-helicase
SAS4
AAA_16
ResIII
DUF4164
RNA_helicase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
113486650
NCBI-ProteinID:
XP_026716529
LinkDB
All DBs
Position
17
AA seq
2803 aa
AA seq
DB search
MYEKIMSTCRWCTLSGSDTTEFLKSYASKRLSPEDLEGSSDDLCYCLECVVEYHKAKEKL
PRLHEVLWELETSRLVAHIEKSMQEEAGDDDELFIVDENGDTQLSGYVGPDFENNLRVPL
IEMLKYPYLLLHERVAELCVEVLCRMEQSHCSFQVFEKYAGIYLFLVHPNELIRRWAILT
ARNLGKVDRDDYYDLQEVLTCLFRVIELGLFERPDIYSSSVVEKGKLILLPSHLYDTANY
KNYWLGICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKEAADDSADPFWPALHCFM
VILDQLGSKVWGQLIDPVQAFQTIINSVSYNNEIRNIRSSFKRMKSEPESDCGDDMVTCS
QMVYNYNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGREMRVHHSTFLWFIP
FVQSLMDLKDLGVAYIVEVIHYLCSEIRGILNERMQQCDKISEFFLLILVSIIELHRNKK
CLHLLWISSQEWVEAVVRCAKLPGIAFTRCTEKASGHYARGSSAVSLQASNSVQHACVQL
IRSLLKEGYQLGQHTLCKQYLDKLNLLLRANLSSGWQLNIQETQELQMCLRQVIRSIKDK
VLNTSMSVGNTNSTTLPAASIKQERSVYSDGFEMGAHSRDDLCSPFVAVWKEGRGGDSRE
NPFPRRETAWEEECRDAFKSSRSWTPTDMNIKKECNDFTMWEYVCPQDSLAPKICGKVKE
NRNSDLVVRQSDTDNQCFNPSAQHSDFRREESGNKCEAASITPMHLAAQTHIGSPERVYS
SDVKESSMSPSSSSKFKVDAHKLANLKDKVQKIKWPSELLKPAKPCDLKKSHLATSASKA
EVEQSKFSTDYMCTSKDKHQGVNTSCGNEISVDSSSSRSYESTQEKSVSSAFQSGLVLTK
QVSKETPLDCSSSSKNVPGVEENEDGSILLPEISDTSLKKVATEEKSVLKSLFKKDTDMQ
TSDWGQPNLNDLVNYDCKGQISKTFCMDKTSGNGCVPSSSENKRDISNSASQIRPLSVKC
ESSDRLFEFSEYFKRENSVGKEEEDFAKMDSEDNLTDSQVDRELSKLAAHARGVDFPFDA
NQETSVPQNICGIKRKVKGAVRSSSDDQGTKSPCDTDSLDNQVIIISDSSDEEEKGVADK
EETKKRNENVCSEKQPSTSSCISDSGNKTKAKAPNSPLLLEDCESQYFEFETEDDVFSVW
QDTQVYSMEETQEYKQDRVLTSVDRSSSDVLVNDHTNEWGYDMDYMSDDTMEEAANLTEK
QVENISHEKEADNTKLTNSTLEESVSKGSPKGQLENFADKGTVAKDFTLDSKVTEHRAST
SNVSLASKLALKKSSMSPRKKIAKSEIARTSQRSPKKPPVLKTAQNKLLQSTSKNSQPGR
LMPAVVPPRKVRQRPAPASTVEKLGLKKAPRKAFELSQRSLDSVAALRSHGKAAGRVGVA
QKQKTKLIAPQTLSVKHNKKLLACQDRQFLRQIRPQKSVRVKSPAASSESRSKNVSKVNT
KSMKQMPKSFELASVERSVKNQREKKREETVCPSASERKFESLSVKETYVSRMPCSSDSN
RKLEDSSMMVPPVSRDSSLSSAALVGDKDEPSGEGCIVQPESETTTSEENGSKPNENRED
DDSLFLTQLDPIDMDLCSQEESVQDYTVASKKPEEMDTAERLQQDESSTPVKSKYKDCVE
KAGEGSSNHPGTSSETDHLFAKPSLLPPSKTRKPSTTKTFSSSSSSRNAAFSKDLEDVKK
PPSASKSKLNAAKPVAARPPNAMAIPAGNQTSRSPSPSKVLQPHSSNNVLWSQNRQNDNA
SNISRRPAPEARSNFLDSQQRERLFYDVILHWTYEMFTYASQVGTPVNLHSVVHSVPVRF
RGYDEYFSTFFPLMMLNAFETLVQDWMENQRAEEKSYYFYLQNFWAHTNTANFTAYFQES
DLARQLHPKEDDLIFFVVQKKKDTLKEESEMENHTMNYVGLVRRFSRASGCSARQKDQHT
LCHLCVETQSNLSFFINKKVKCVVVGSLVTTRRTFKGLNLLPKSFLAKSIMDPNYSDFCP
RGLPVASESAASDMNEYNEDQKRAIETAYAIVKEHPVLPKICLIHGPPGTGKSKTIVGLL
SRVLRENTRNEKTTQRVSSKIKPNRFLVCAPSNAAVDELMKKIIIAFKEKCQNKQEPLGN
CGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPTECDQDIQKKKAALDQKLDMLSRQ
RAMRRCERRESQMLDDEIGRLSKERQQLASQLKEVRGHSQKVQTDILLESDIICCTLSTS
GGSLLEGAFWPQRHCPFSCVIVDEAGQSCEVETLIPLLHYCSKLVLVGDPRQLPPTVKSI
KAQECGYGQSLMARLHKHLEEQVQQNFLRSLPVVQLTVQYRMHPDICLFPSNYVYGRTLK
TDKATEENRCSSDWPFQPYLIFDVGDGREERDNDSFSNPQEVKLVMELIRTIKEKRKDLG
VRRIGIITPYSAQKKKIQEQLDRVFRNNSPGEVDTVDAFQGREKDCIIVTCVRANSTKGS
IGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNQLIQDAQKRGAIIKTSEKNYRKD
AVKILKIKAAVQPPTKAGGTKPPPPWQAGSSRSKRGEFADAREASSPRELAAGHMALQGS
RGPQQVQGAQAADSRRGSASACREAAALPADKPRDPRLVSMATRTETQGKEQVSKDSSWS
AQSNPGSTSQQGLRDQISGKETSKKPQQKTGRCDVASTSSYAARREGGWRAPVLRNSSRA
LSEGGQSNSSKTDKDYRGLTRRTPEELPENTESISAKRRKTSQ
NT seq
8412 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagaaaataatgagcacatgtcgatggtgcacacttagtggttctgacaccact
gagttcctgaagagctatgcttctaaacggttgtccccggaagatcttgaaggatccagt
gatgatctctgttactgcttggagtgtgtggttgaataccacaaagcaaaggaaaaattg
ccaaggttgcatgaggtcttgtgggagctggaaacctcccgtcttgttgcccacattgag
aaatccatgcaagaagaagctggagatgatgatgagttgtttatagtggatgagaatgga
gacacacaactctctggttatgtgggcccagattttgaaaataacctgcgagtgcccctt
atagaaatgctgaaatacccatatctgctgctgcatgagagagtcgctgagctgtgtgta
gaagtgctctgtagaatggaacaaagtcactgctcctttcaggtctttgagaaatatgcg
ggaatttatctctttttggtacacccaaatgaactgattcgtcgatgggccatcctaaca
gcaaggaatttagggaaggttgacagggatgattactatgacctacaggaagtgctgact
tgcttgttcagagttattgagttggggctttttgagaggccagatatttacagctcttca
gtggttgagaagggtaaactcatccttctgccatctcatttgtatgatactgccaactac
aagaactattggctagggatttgtatgttgctgacagtgctggaagaacaagctatggac
tccttgttactgggcccagacaaacaaaatgatttcatgcagtctatacttcacaccatg
gagaaagaagcagctgatgattctgctgaccccttctggcctgcgctgcattgtttcatg
gttattttggatcagctcggatctaaagtatggggtcagcttattgatcctgtccaagcc
tttcaaaccattatcaacagtgtgagctacaacaatgaaataagaaatatacgcagtagc
tttaagaggatgaaatctgaaccggagtcagactgtggtgatgacatggttacttgcagt
cagatggtgtataattataacacagaaaagccccaaaaggatactggctggaagacagcc
atttgtccagactactgccccaacatgtacgaagacatgcaaacactggctaatgtgctt
cagtctgatattggcagagagatgcgtgtccatcacagcacgtttctgtggttcatccct
tttgttcagtcacttatggatctcaaggacttgggtgtagcatatatagtagaggtcatt
cactacctctgctcagaaatcagaggtattctcaatgaaagaatgcagcagtgtgacaaa
atctctgaattttttctcctgatcttggtgtcgattattgaactacacagaaataaaaag
tgcctgcatttgctgtggattagctcccaagaatgggtggaagcagtggtgagatgtgct
aagcttccaggtatagcatttacacggtgcactgaaaaagcatctggacactatgcaaga
ggttcatcagcagtatctttacaagcctctaactctgtgcagcatgcctgcgtgcagttg
atacggagccttcttaaagaaggctatcaacttgggcagcatactctttgcaagcaatac
ctagacaaactcaatcttcttttgcgagcaaatctatcttcaggttggcagctgaacatc
caggaaacccaggaattacaaatgtgtttaaggcaagttataagaagtataaaggacaaa
gtattgaatacctccatgtctgtaggaaacacaaactctaccactttgcctgccgcctct
ataaagcaagagaggagtgtatatagtgatggatttgagatgggtgcacacagcagagat
gacctttgttcaccatttgttgctgtatggaaggaaggcagaggtggagattctagagag
aaccctttccctagaagagagactgcctgggaagaggaatgtagagatgcatttaaaagt
tcaagatcttggacacccacagatatgaatattaaaaaggaatgtaatgacttcacaatg
tgggaatatgtctgcccgcaggactctttggcacctaaaatatgtgggaaagttaaggaa
aatagaaacagtgaccttgtggtaaggcaaagtgatacagataatcagtgctttaatcca
agcgcccagcattcagatttcagaagagaagagtcgggaaacaaatgtgaagcagcatcc
ataacaccaatgcatctggctgctcaaactcatattggttctccagaacgtgtttatagc
tcagatgtaaaggaaagcagtatgtctcccagttcctcttcaaagtttaaagtagatgca
cataagcttgcgaatttgaaagacaaagtacagaaaatcaaatggccctcggaattactg
aagccagcaaagccatgtgacttaaaaaaatcccatttagcaacaagtgcttcaaaagca
gaggtagagcaatctaagtttagcactgactacatgtgtacaagcaaagataaacatcag
ggagtgaatacatcatgtggaaatgaaatctctgttgatagttcatcttcaaggagttat
gaaagtacacaggagaagagtgttagcagtgcttttcaatccggactggtcctcactaaa
caggtatcaaaagaaacaccactagattgctctagctcctctaaaaatgtacctggtgtg
gaggaaaatgaagatggcagtattttgcttccagaaattagtgacacctcactgaaaaaa
gtagccactgaagaaaaatcagtgttgaagtctctgtttaagaaagacactgacatgcaa
acttcagactggggacagcctaatctaaatgacttggttaattatgactgtaaaggtcaa
atttcaaagacattttgtatggataaaacttcaggaaatggttgtgttccatctagctct
gaaaacaagagggatatatccaactctgcttctcagatcaggccactgtcagtgaagtgt
gaatcaagtgacaggttatttgaattttcagaatatttcaagagagaaaattcagtgggg
aaggaggaggaggattttgcgaagatggattctgaagataatttaacagattcccaggtt
gatagagaactcagtaaattagctgcgcatgctagaggtgttgattttccttttgatgca
aaccaagaaacctcagtgcctcaaaatatttgtggtattaaaaggaaagtgaaaggtgct
gtaagatcttccagtgatgaccagggtaccaagtctccctgtgataccgatagccttgac
aatcaagtcattataatttcagactcttccgatgaagaagaaaaaggtgtggctgacaag
gaggaaacaaaaaaaaggaatgaaaatgtgtgttctgaaaagcagccttcaacttccagc
tgcatttctgatagtggtaacaaaacaaaagcaaaggctccaaactctcccttgttactg
gaagactgtgagtctcagtactttgaatttgaaacagaagatgatgtcttttcggtttgg
caagatactcaagtgtatagtatggaagaaactcaagagtataaacaagatcgtgttttg
acatcggttgatagaagtagttcagatgtcttagtgaatgatcacacaaatgaatggggt
tatgatatggattacatgagcgatgataccatggaagaggcagcgaacttgacagaaaag
caggtagaaaacatttctcatgagaaagaagctgataatacaaaactaactaattcaacg
ttggaagaatctgttagtaagggaagtccaaaaggtcaactggagaattttgcagacaaa
ggtactgttgctaaagacttcaccctggactcaaaagtgactgaacacagagcatctaca
tctaatgtctcattagcttcaaaattggcccttaagaaaagtagcatgagcccacggaag
aaaatagcgaaatctgagatagcaagaaccagtcaaagaagtcctaaaaagcctcctgtt
cttaaaacagcacaaaataaattacttcaaagtacatcaaaaaattcacaacctggtagg
ttaatgcctgctgtggttcctccaaggaaagttcggcagcgtcctgcaccagcatcaact
gtagaaaaacttggtctgaagaaggcaccccgcaaagcatttgaattatcccagaggtct
ttagatagtgtagctgcattgcgcagccatggtaaagctgcagggagagttggagttgca
cagaaacagaagactaagctaattgctcctcagactttgtctgtaaagcacaataaaaaa
ttactagcctgccaagaccgtcagtttttaaggcagataaggccccaaaagagcgtcaga
gtgaaaagtcctgcagcaagttctgagagtagaagtaaaaacgttagcaaagtgaataca
aaatctatgaaacaaatgcctaaaagttttgaactggcatctgttgaaagatctgtcaaa
aaccaaagagagaaaaaaagggaggagacagtttgtccctctgccagtgagagaaaattt
gaaagtctgtctgtgaaggagacatatgtctctagaatgccatgttcttcagactcaaac
agaaaattggaggatagcagtatgatggttcctcctgtatctagggattcaagtctctct
tcagctgcacttgttggagataaagatgaaccttcaggagaaggttgcattgtgcagcct
gagagtgagacgacaacttcagaagaaaatggaagtaaaccaaatgaaaacagggaggat
gatgatagtttatttttaactcagttagatcctatagatatggacttgtgttctcaggag
gaaagtgttcaagattatactgtagctagtaaaaagccagaggaaatggatactgctgaa
agacttcagcaggatgaatcctcgactcctgtgaaatcgaagtacaaagactgtgtggaa
aaagcaggagagggctctagtaaccatccaggcaccagctcagaaacagatcacttgttt
gccaaaccctctctcctgccaccttctaaaacaagaaagccttccactaccaaaactttc
agctcatcaagttcttcacggaatgcagccttcagcaaggatctcgaagatgttaaaaag
ccaccatcggcttcaaaaagcaaactgaatgcagcaaaaccagtggcggccaggccacca
aatgcaatggccataccagcaggaaatcaaacatccaggtctccaagtcccagtaaagta
cttcaaccccatagttctaataatgttctctggtcacaaaatagacagaatgacaatgct
tcaaatatttcccgaaggcctgccccagaagcacgttctaactttcttgatagtcagcag
cgtgaaagattgttttatgatgtaattctgcactggacttatgaaatgtttacctacgcc
agccaggttggaactccagttaatctgcattctgtagtacactctgttcctgtccggttt
cggggatacgatgagtattttagtacgtttttccccttgatgatgctaaatgcctttgaa
acgctggtgcaagactggatggaaaatcagagagcagaagagaagagttactacttctac
ttacagaacttctgggctcacacaaatacggcaaattttacagcttactttcaagaaagt
gatttggcaaggcagcttcatccaaaggaggatgacttaattttttttgtggtacaaaag
aaaaaagacacccttaaggaagaaagtgagatggagaaccatacaatgaattacgttggt
cttgtgagacgattttctcgtgcatctggctgttcagctagacaaaaggatcagcatact
ctctgtcatctttgtgtggaaactcaaagcaatttgtcattcttcataaataagaaagtg
aagtgtgtggtggttggctccctggttaccacacgccgaacattcaaaggtctaaaccta
ctgcccaagagtttcttggctaaatccatcatggatccaaattacagtgacttctgtccc
agaggtttgcccgtagcttcagaaagtgctgcatcagatatgaatgaatacaatgaagat
cagaagagagccattgagacagcttatgctatagtaaaggaacatccagtgcttcccaag
atttgcctcatccacggaccacctggaacagggaaatcaaaaactattgttggacttctg
tctcgtgttttgagagaaaacactaggaatgaaaagacaactcaaagagtaagttccaag
atcaagccaaaccgatttctagtttgtgcaccatcaaatgctgctgttgatgaactcatg
aaaaagatcatcattgcatttaaggaaaaatgccaaaacaagcaggagcctttgggaaat
tgtggtgatatcaaattagtgcgacttggtgctgaaaaagcaatcaacagtgaagtccgg
ggatttagcctggataagcaagttgaacacagaatgaaacgaaagccaactgagtgtgac
caggatattcagaagaaaaaagcagctctggatcaaaaactggatatgctgtctcgtcag
cgtgccatgcgcagatgtgagaggagggagagtcaaatgttagatgatgaaattggcaga
ctttcaaaggagagacaacagcttgcttctcaactaaaggaggttcgggggcactctcag
aaagtacagacagatatcctcttggagtccgacatcatctgctgcactctgagcacaagt
ggaggaagtctgctggaaggtgctttttggccgcaaagacactgtcctttcagctgtgtc
attgtggatgaggcagggcagtcctgtgaggttgaaacgctgattccactgttgcattac
tgttctaaacttgtccttgttggagatcccagacagctccctcctactgtaaaatcaata
aaagctcaggaatgtggctacggccagtccttgatggcacgcctgcacaagcacctagag
gagcaagtgcagcagaactttttgcgaagcctgccggtcgtgcagctgacggtgcagtac
aggatgcatcctgacatctgcctcttcccatccaattatgtttatggcaggactctaaag
actgacaaagcaacagaagagaacagatgttcttcagactggccgttccagccctacctt
atttttgatgtaggagacggtcgtgaggagcgagacaatgactcttttagtaatcctcag
gaagtgaagctggtgatggaattaattagaacaattaaagaaaaaaggaaggatctggga
gttcgtcgcattggaataattaccccttacagcgcgcagaaaaagaaaattcaagaacaa
ctggacagagtgtttagaaataacagcccaggagaagtggatacagtggatgcattccag
ggacgagagaaagactgcatcatagtgacatgtgtccgggcaaacagcaccaaagggtca
attggatttctggcaagtcttcagcgtctgaacgttacaattactcgagccagattcagc
ctcttcatccttggaagactgaaaacgctgatggaaaataaagactggaatcagttgatt
caggatgctcagaagagaggtgccattatcaagacatcagaaaaaaactacaggaaagat
gctgttaagattttgaagatcaaggcagcagtacagcccccaaccaaagcaggagggaca
aaaccacctcctccatggcaggctggttcttcccgtagcaagaggggtgagtttgcagat
gcaagggaggccagtagcccacgggagctcgctgctggccacatggcactacagggaagc
agagggccccagcaggtgcagggtgcacaggctgcagactccaggagaggcagtgcctct
gcatgcagggaggctgcagcgcttcctgctgataaaccgcgggacccgaggctggtgagc
atggccactagaactgaaacacaagggaaggagcaggtctcaaaggacagcagttggtca
gcacagagcaacccagggtcaacgtcacagcaaggcctcagggatcagatttctggaaaa
gaaacatctaagaagccccagcaaaaaacgggacggtgcgacgtggcttcaacgtcgtct
tacgcggctcggcgcgagggtggctggagagctcctgtattgagaaacagttcaagagcc
ctcagtgagggaggtcaaagtaatagcagcaagacggacaaagactatcgtggtttaacg
aggagaacaccagaggaattgccagagaacacagaatcaatcagtgccaagcgaagaaag
acctctcagtga
DBGET
integrated database retrieval system
