Athene cunicularia (burrowing owl): 113486713
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Entry
113486713 CDS
T05777
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
acun
Athene cunicularia (burrowing owl)
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113486713 (HELZ)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
113486713 (HELZ)
3'-5' decay
Other 3'-5' decay factors
113486713 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
AAA_22
zf-CCCH_4
AAA_16
AAA_7
Bac_DnaA
AAA_5
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
113486713
NCBI-ProteinID:
XP_026716694
LinkDB
All DBs
Position
18
AA seq
1942 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAELDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHSPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSNTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANTTKQQQSPPKGKVHHHNQNDH
FPPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNMVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPV
SIGQQQQLQHQDKEQHEQSRNGKSENTAGPEISKIRTPEKKPLESKQVDLEANSQNRSPE
SRSSVGYPNAKFHRKENLNPRQLNLHLTPPHSQYAVPNRHFQHLSQIPRQPYPLQQQQNL
LSQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNPIPHRP
HSPAVDAVISEQHPPPMLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGMPLGDTLDRMH
GNVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRAN
WKLASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRSPPAL
PSPSCNSNHSAHFPNFTENNRDIEIPSNPAFQQHLPQIYNPPFSMPSEHITPSPLKYLQP
DGSWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHAVGQEPFHPLASRAVSA
SSLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNYS
PPELWVNSSSSAPYPNIPCNGANRAVPPRELLAPPKTVKPPEEHLKAENIQLSNSFNYSV
LQHLGQFPPLMPNKQIVESNSSSQQNAGGSKPVMSYASALRAPPKPKPPPEQTKKNSDPL
SLFQELSLGSSSGSNGFYSYFK
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaactcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaaatatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccgtcaggatatcatgtagaagatttagaagaaggg
tcccgggatggctggcagttccgccctccgcccaggggagtcacaagcagtgaagaatac
acgctatgtaaaagatttttagagcaagggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagaactaacagaatggcaaaaacgatatgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacaatgttcgggcagttatatggaaaccttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacatagtcctgagctatcggtaactgtcaccaccaaaaagtctcatcagacatgg
acatttgcgctcacctgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtatcgttgcaatatctgctggagacagcaatacccaggta
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaacgga
atagatcattatatatacaaagtcagtatagcatttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgactttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcatgcacggcaacagctactaacc
acagctaagcgttgggattctacttctaagactattgtagaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaatccctctgtctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctacat
gacctcctttatatagaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaatggacaactttttggccgctttaagctcactgaaacgctttcggaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaagattatatcttcttgagggtatccagggaatgctgcgaagaacttaatctt
cgggcagactgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattacgccttggacaggattaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctaaatgctaagcagaaagaggctgttctggctatcaccactccgctttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaacgttcactctggctcaggca
gtcaagcacatactccaacaacaggatactagcaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagtt
gtgcatcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaa
gacattcttaagcaacgagtagtagttgttactttaaatacatcacagtatctatgtcaa
ctggatcttgaaccaggtttttttacacacattctgttagatgaagctgcgcaagctatg
gagtgtgaaactattatgcctctagcattagctaataaaaacacaagaattgtcttggct
ggagaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaacctt
catgtttcattgcttgatcggctctatgagcactaccctgcagaatttccatgcaggatc
ttgctgtgtgagaactatcgctcccatgaagctatcatcaattatacatctgaacttttc
tatgaaggcaaattgatggcaagtggaaagcagccagcacacaaagacttctaccctttg
actttcttcacagcacgtggagaagatgtgcaagaaaaaaatagtacagctttttacaat
aatgcagaggtgtttgaagtagtagagcgtgttgaagaattgagaagaaaatggcctgtt
gcctggggcaaattggatgatggcagtataggtgtcgtaacaccttatgctgatcaagtg
ttcagaattcgggctgaacttcggaaaaaaagactgtctgatgtcagtgtagagagagta
ctaaatgttcagggaaaacagtttagagttttgtttctcagcacagtacgaacacggcat
acatgcaaacataagcaaacaccaattaagaggaaagagcagttactggaggattcaaca
gaagacttggattatggttttctgtctaattacaaacttctcaacactgccattacaaga
gcacaatccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgc
aggaaattttgggaaaggtttattgccctatgtcatgagaatgaaagtctccacggtatc
acatttgaacagatcaaagctcagttggaagctttggagttaaagaaaacttatgtgttg
aacccactggctcctgagtttatcccccgagctcttcggcatcagcattcagcaaatacc
accaaacagcagcagtcaccaccaaagggcaaggtccatcaccataaccagaacgaccat
ttcccacctgatggcattgttcagcccaatccttctgtactaattggaaatcctatccga
gcatatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagt
cctgttcaaaggatagatccacacactgggacaagtattctctatgtacctgctgtctat
ggaggaaatatggtcatgtctgtgcctttgcctgtaccatggacggggtatcagggtagg
tttgcagttgacccccgaatcattactcatcaagcagctatggcatataatatgaacctg
ttacaggcacatgggcgtgggtctcctatcccttacggcctgggacatcattcacccgtt
agcataggacagcagcagcagcttcagcatcaagacaaggagcaacatgaacaaagtcga
aatggtaaaagtgaaaacactgctggacctgaaatcagtaaaattcgaacacctgagaag
aaacctctagaatccaagcaggttgacttagaagcaaattctcagaatagaagcccagag
tcacgttccagtgttggttatcctaatgctaaatttcatcgcaaagagaatcttaacccc
aggcagctgaatctacatctcaccccaccccactcacagtatgcagttcccaatcgtcac
ttccagcacctgtcacagataccaaggcagccatatcctctgcaacagcagcaaaacctt
ttaagtcaacaacaaaatcatttgcctgaacagcaaaaccaaatgccaccccagcaaagc
caggtagttcagcagcataatcatttgaatcagcagcctccacaaccttcgcagctttcc
cctgcttatcaggcaggccccagccaatctttttttaataatccaattccccaccgacca
cattctcctgctgtagatgctgtgatttcagaacaacaccccccacctatgttacaagaa
gtcaataatcctttgaggcctattgcacagcacaaccctgttctgccaacccacttgaac
aacttcattgaagagaatccatcaggaatgcctttaggggacactttagatcgtatgcat
ggaaatgtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatggaat
gaacataatgcctatctcagtcaaggcactattccatatcaacaccatcaccatcctcat
ctaccacatcttcctcagcaaccaattggattgcatcaacagcagcaagttagggcaaac
tggaaacttgccagtaatacagaagatgaaacagaggctacatattcaagattccaggat
ttgctcagagaactgtcacaccgtgatcaaagtgaaagtcgggacttagctgaaatgcca
ccccctcagtcaagactgttgcaatacagacaagttcagcccagaagcccaccagcactc
ccttctccttcctgcaactctaaccacagtgctcactttcctaacttcactgaaaacaac
agagacattgaaatacccagtaacccagcatttcagcagcatttaccccaaatatacaat
ccccctttctcaatgccatctgaacatataaccccatctcccctgaaatacctgcaacct
gacggatcgtggacttatgctaacctacagcagaatcaccttatggggcagggctttcac
tatggtatacctccattgccccataggtcacaacaaaacccttttatacaaatacagaat
catcagcatgcagtcggtcaggagccatttcatccactcgcatctcgagcagtatctgct
tcttcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaa
agaagaatttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagat
agtcttggtcagtgtaaagagcttcaggaccacagtaaccagtcatctttcaactactca
ccacctgagttgtgggtaaactcctcctcatctgccccatacccaaacattccatgcaac
ggagccaacagagcagttccaccccgggagttgttagctccaccgaagacggtcaagccc
ccagaggaacacctgaaggccgagaacatacagctctccaattccttcaactacagcgtg
ctacagcatcttggccagttcccacctctcatgcccaacaagcagatcgtcgagtcgaac
agcagcagccagcagaacgctggtgggagcaagcctgtcatgtcctacgcaagtgctctg
cgggctccaccaaagcccaaacctcctcctgagcagacaaaaaagaatagcgaccctttg
tctttgtttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctat
tttaaataa
DBGET
integrated database retrieval system
