Athene cunicularia (burrowing owl): 113486989
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Entry
113486989 CDS
T05777
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
acun
Athene cunicularia (burrowing owl)
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113486989 (TNRC6C)
03036 Chromosome and associated proteins [BR:
acun03036
]
113486989 (TNRC6C)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113486989 (TNRC6C)
Chromosome and associated proteins [BR:
acun03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113486989 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
113486989
NCBI-ProteinID:
XP_026717132
LinkDB
All DBs
Position
18
AA seq
1808 aa
AA seq
DB search
MVGRLLSSDLSHSGLGDHYENSHWGQQPAFRSEGNCSWDKVIIDRTDKEAWPSITGAETE
SASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGALVQSTSNQSALGA
GGANGNGNSARVWGVAAGSSSGLAHCSASGGDGKMDNMMGDGRSQNCWGASNSNAGINLN
LNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGPNMGNQNGNPTGTLGAWGNLLPQES
TEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIP
PHLQGLPGANGTSVSQVSGGSGEGMGSSVWGMSPGSPATGNSNSGFSQGNGDTVNSALSA
KQNGSSSAVQKEGNGASAWDSGPPSGPGVLAWGRGSGNSGVGNMHSGAWGHPNRNTSNGV
NGEWGKVPNQHSNSDINGKGSTGWDSSSVTSPNPAMQQGNEQINSWAKAAASGTTASEGS
NDSGGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTA
WEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGWVNSPPAAVPT
NTGWGDNNNKAPNGPGGWGESASSTTVNNAAAAKSGHAWSGTANQEDKSPTWGEPQKPKS
QNWADGQKSNPSWTSGGGDWADSSSVPGHLGEGKKNGSGWDSDNRSGSGWNDSTRSGTSG
WGNGTNSKANTGTSWGESLKPGPQQNWANKPQDNNVSNWGGAASVKQTGSGWVGGPVPAK
QKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPIIQSSTTTNT
TTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPAGWGEMPTVHTKTEASWGEPSSPSAAVD
NGTSAWGKPPSSGTGWGDNPAESAGTYGRTNAPAAAPALCKPASKSMQEGWGSGGDEVNL
STSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQLT
DMGFPREPAEEALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPIS
KESSMDRPTFLDKLTLSFSNQDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGLASG
LGMQNLNSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQ
VQAQLLQFAAKNIGLSPAQLTSPINNPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVS
GPMRQQEQQVARTINNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPH
PQAPGLPDLQTKEQQSSPNTFAPYPLAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWT
HPNSMDNLSSAASSLDQNSSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPV
AVPHSWSRAKTDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTIN
TTIQDVNRYLLKSGGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIK
STWSSGPISHTQASLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGS
AWSTDSSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEA
AKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQPLPPTSSWQSNTGTNQTRLGSSSSS
HGLVRNDAGHWNTPCLGSKGSSDLLWGGVPQYSSSLWGPPSTDDGRVIGSPTPLNTLLPG
DLLSGESI
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggttgggcggctcctttcttcagatctcagccacagtggattgggagaccattatgag
aattcccactggggacagcagcccgctttcaggagtgaaggcaactgcagctgggataaa
gtgataatagacaggactgacaaggaagcgtggccttccattaccggagctgagactgag
tctgcctcagaatgtactacagacactgactctgcctccaactgtggctcagagaacagt
agcatggctacagggagtgcccaaggcaacttcactggacatacaaagaaaactaatggc
aataatggcgccaacggagcactcgtccaaagcacttctaaccagagtgcccttggagct
ggtggagcaaatggtaacggcaactcggccagagtgtggggtgtggctgcgggctccagc
tctggcctagctcactgctctgccagtggtggggatggaaagatggacaacatgatggga
gatggtagaagtcagaactgctggggtgcttccaactcgaatgctggcattaatcttaac
cttaaccctaatgccaatccggctgcctggcctgtacttggacatgaaggaactgtggga
gcaggcaacccttccagtatttgcagtccagtcagtgccataggtccgaacatgggcaac
cagaatgggaacccaacaggcaccttaggtgcttggggaaacttgctgccgcaagagagc
acagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaacctt
aacactgatggaccaaataacactaaccccatgaactcttcaccaaaccctatcaatgca
atgcagacaaatggactgccgaactgggggatggctgttggtatgggggccatcatcccg
ccccacctgcaaggccttcctggtgctaacggaacatcagtttctcaagtcagcgggggc
agtggtgaaggaatgggcagttcagtgtgggggatgtccccaggtagtcctgccacagga
aacagcaattctgggttcagtcaggggaatggagacactgtgaactcagcattaagtgct
aaacaaaatggatccagcagtgctgtgcaaaaggaaggaaacggagcgagcgcgtgggat
tcggggcctccttcaggtcctggggtactagcgtggggcaggggcagtggcaacagtggt
gttggtaatatgcattctggagcttggggccaccccaaccgtaacaccagcaatggtgtg
aacggtgaatggggcaaggtcccaaaccagcattccaatagcgacatcaatgggaaagga
tcaacagggtgggatagctctagtgttaccagtccgaatcctgccatgcagcagggcaac
gaacaaataaactcttgggccaaagctgcagcatctggcaccacagctagtgaaggaagt
aacgacagtggtgggagtcaaaatgaaggcagtactgggagggagggggctggagagggc
aggaggagagacaaagggatgatagaccaagggcaagttcagttaccaagaaatgacctt
gaccccagggtcctgtccaatacagggtggggacagacccctgtaaagcaaaacactgcc
tgggaatttgaagagtccccaaggtctgaacgaaagaatgacaatggaacagaggcctgg
ggttgtgcagctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaac
agtacaaatacctcttcagtatctgggtgggtcaactctccaccagcagctgttccaaca
aatacaggttggggagacaataacaacaaagcaccaaatggcccagggggatggggagag
tcagcaagctctactactgttaataatgctgctgctgccaaaagcggccacgcttggagt
gggaccgcaaatcaggaggacaaatcacctacctggggtgaacctcagaaacccaaatct
caaaactgggcagatggacagaaatcaaatccaagctggacttcaggaggtggagattgg
gcagattcatcatctgttcctggacacttgggtgaggggaagaagaatggatctggatgg
gattctgacaatagatcagggtctggttggaatgattccacaaggtctgggaccagtggg
tggggaaatggcacaaacagcaaggctaatacaggtacaagttggggggaatctttaaag
ccaggcccccaacaaaattgggctaataaaccccaggacaacaatgtgagtaactgggga
ggagctgcttctgtaaaacagacggggtcagggtgggttggtgggccagtgccagccaaa
caaaaagagaactgtgaggcaactggctgggaagagccatctccaccgtccattcgccgc
aagatggaaatcgatgatggtacctcagcttggggcgacccaaattacaacaacaacaag
actgtaaacatgtgggatagaaataatcctataattcagagcagtaccacaaccaatacc
accaccactagcaccattatcaacacaaatatggttgaacctcagccatcgcaccagtca
agtgcccagccgaaccggtccccgctgcttggtccagcaggctggggagaaatgcctact
gtccacacaaagaccgaagcttcttggggagagccgtcatccccttctgctgcagttgat
aatggcacttcagcatgggggaaaccccccagcagtggtacagggtggggagataatcct
gccgagtcagcagggacatatggaagaacaaatgctccagctgctgccccagcactgtgc
aaaccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgaagtgaatctc
agtactagtcagtgggaagatgaggaaggagatatgtggaataatactgcttcacaagag
agcagctcctcctgtaattcctgggggaacgccccgaagaaaggacttcaaaagggcatg
aagacatctagcaagcaggatgaggcctggatcatgaaccgtctgataaaacagctcaca
gacatgggcttccctagagagccagcggaagaggccttgaagagcaacaatatgaatctc
gatcaggccatgagtgctctgctggaaaagaaggtggaaatggacaagcgtggaatggga
gtgaccgactataatggaatggtcaccaaaccccttggctgccgcccaccaccaatctcc
aaagagtcttccatggaccgccccaccttccttgacaagctcaccctttctttctccaat
caggatggcggcctagtggaagagcccactacttcaccatttttgccttcaccaagcctg
aagctccccctttcaaacagtgcactccctaatcagaccctgggcgggcttgcctcaggg
ctgggcatgcaaaacttgaattcttctagacagataccgagtggcaatctgggtatgttt
ggcaatagcggagcagcacaagccaggaccatgcaacagccgcagcaaccgccagtgcaa
cctcttaattcatcccagcctagtcttcgtgctcaagtgcctcagtttctatcccctcag
gttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcagccctgcacagtta
acctcgccaattaataatcctcagcatatgacgatgttgaaccagctctatcagctgcag
ctggcgtaccaacgtttacaaatccagcagcagatgttacaggctcagcgtaatgtttcc
ggacccatgagacaacaggagcagcaagttgcacgtacaatcaataacatgcagcagcag
atccagcagcaccagcgccagctggcccaggccctgcttatgaagcagcagcctccccct
ccacatctatctttgcacccctctgcaggcaaatcagccatggatagcttttcaccccat
ccccaggctcccggcctacctgacctgcagaccaaagagcaacagtcttcaccgaacacc
tttgctccttaccctcttgctggactgaacccgaacatgaatgtaaataacatggacatt
actggtggtttgtcagtgaaggacacttctcagtcccagtctcgccttcctcagtggaca
caccccaactcaatggataatctgtctagtgctgcttcttcacttgaccagaactccagc
aagcacggtgctatacctggaggtttaagtattggtcctccgggaaagtcctccattgat
gactcttatggccggtatgatctgattcaaaacagtgagtcgcctgccagtccacctgta
gctgttcctcacagctggtcacgtgccaaaaccgatagtgataaaatttccaatggctcc
agcataaactggccaccagagttccatccaggagtgccatggaaaggactgcagaatatt
gatcctgaaaatgaccccgatgttactcctggaagtgttccaactgggcctactataaac
accacgatacaggatgttaatcgctatcttctcaagagtggagggtcatccccaacatca
tctcagaatgccacgctgccttcatcgagtgcctggccgcttagtgcctccggctacagt
agctctttcagcagcattgcatccgcacctagcattgcaggtaaattgtcagacatcaag
tctacgtggtcctctggcccaatctctcacacacaagcctctctgtcccatgaactatgg
aaggtacccagaaacactactgctcctacgagaccacctccaggcttaacaaacaccaag
ccatcatctacatggggtgccagtcccctgggttggaccagctcttactcctctggttct
gcatggagtactgacagctcagggagaacaagcagctggctggttcttcgaaacctcaca
ccccagattgatggttccacactgcggacactgtgtttgcaacatggccctctgataaca
ttccacttgaacctgacgcaagggaatgctgtagtccgatacagttccaaggaagaagca
gccaaggcccaaaagtctctgcatatgtgtgtcctgggaaacactaccatcctggccgag
tttgctggtgaagaagaagtcaaccgtttcttagcacaaggccagccactgccgcccacc
tccagctggcagtccaacactggaaccaaccagacgcgcctgggctcctcgagcagctct
catggcttggtgcgcaacgacgccggccactggaacactccctgcctggggagcaagggg
agcagcgacctgctgtggggtggggtgcctcagtactccagcagcctttggggaccccca
agcaccgacgacggcagagttatcggaagcccgacacctttgaatactcttcttccgggt
gatcttctcagtggggagtccatctag
DBGET
integrated database retrieval system
