Athene cunicularia (burrowing owl): 113487012
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Entry
113487012 CDS
T05777
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113487012 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acun04131
]
113487012 (RABGEF1)
Membrane trafficking [BR:
acun04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113487012 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
113487012 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
113487012
NCBI-ProteinID:
XP_026717163
LinkDB
All DBs
Position
19
AA seq
539 aa
AA seq
DB search
MNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRTGAKKVAQEK
IVKQGQLGRERNADNILRDLKEIFTPSWELASPTEVLAGKLKAEIQEAKAPSPSINRQAS
IETDRVSKEFIEFLKTYHKPGQDIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEK
LQTRWKVPPEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQM
LCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASA
DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ
SLNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGVKQMYKNLDLLSQLNERQERIVSEAK
KLEEDLIDWTDGITKEVQDIVEKYPLDIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaatcagaacgcagaggaattcatgttgatcagtcagagctactgtgcaag
aagggatgtggttactatggcaatcctgcttggcagggattttgctccaagtgctggaga
gaggagtaccataaggccaggcagaaacagattcaagaggattgggagcttgcagagcgg
cttcagcgtgaggaggaagaagcatatgccagtagtcagagtacccaaggggcacagtca
ctgaccttttcaaaatttgaagaaaagaaaaccaatgagaaaacacgaaaggtcactact
gtgaagaagttcttcactgcttcttccagaacaggagctaagaaggtggctcaagagaaa
atcgttaagcaaggacagcttgggagggagcgaaatgctgataacattctcagggatttg
aaggagatttttactccctcctgggaactggcttcccctactgaagtgttggctggcaag
ttgaaagcagagatccaagaagccaaggctcccagcccttctataaacaggcaggctagc
attgagacagatcgagtatccaaggaattcatagaatttctcaagacatatcataagcct
ggacaagacatctataagcaatgtaaactatttttggacacaatgaatcataaaagggac
ttaagtattgaggagcaatctgaatgtgcccaggatttctatcaaaatgtagcagagaaa
ttacagacacgctggaaagtgccccctgaaaaagttgagaaagcaatggatcaaattgaa
aagtacattatgactcgacagtataaatatgtcttttgccctgaaacaactgatgatgag
aagaaagatcttgctgtccagaagagaatcagagctttgcactgggtaacgccacaaatg
ctgtgtgttcctgtcaatgaagaaattccagaagtctccgatatggttgtaaaagcaatt
acagatattattgaaatggattcaaagcgtgtccctcgtgataaattagcatgcatcacc
aagtgcagcaagcatatatttaatgctattaaaatcacaaaaaatgaaccagcttctgct
gatgactttcttccaacgcttatatacattgttttgaagggaaacccaccccgtctgcag
tctaacattcagtatataacacgcttctgtaatccaagcaggttaatgacaggagaagat
ggctactattttaccaatctgtgctgtgctgtggccttcattgaaaaactggatgctcag
tctttaaatctaagccaagaagattttgatcgttttatgactggtcagacatccccgaag
aagcaagaatctgacagtttttcacctgatgtgtgcctgggtgttaagcaaatgtataaa
aacttagacctcttatctcagctgaatgagagacaggaaagaattgtcagtgaagccaag
aagcttgaggaagacctaatagattggactgatggaattacaaaggaagtccaagatatt
gttgagaaatatccattagacataaaaccaaaaaatcaagccttagcagctattgactct
gaaaatgtggagaatgacaagctgcccccaccactgcagcctcaggtttatgcaggataa
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