Athene cunicularia (burrowing owl): 113489582
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Entry
113489582 CDS
T05777
Symbol
MTREX
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113489582 (MTREX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113489582 (MTREX)
03041 Spliceosome [BR:
acun03041
]
113489582 (MTREX)
03009 Ribosome biogenesis [BR:
acun03009
]
113489582 (MTREX)
03016 Transfer RNA biogenesis [BR:
acun03016
]
113489582 (MTREX)
Enzymes [BR:
acun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113489582 (MTREX)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113489582 (MTREX)
Spliceosome [BR:
acun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113489582 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
113489582 (MTREX)
Ribosome biogenesis [BR:
acun03009
]
Eukaryotic type
Pre-60S particles
Helicases
113489582 (MTREX)
Transfer RNA biogenesis [BR:
acun03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113489582 (MTREX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
113489582
NCBI-ProteinID:
XP_026721234
LinkDB
All DBs
Position
Z
AA seq
947 aa
AA seq
DB search
MPHVKVQAVETVEGCTHEVALPADEDFTGLKPRTGKAAKEYPFILDAFQREAILCVDNNQ
SVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGD
VTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPD
NVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDEN
GDFREDNFNTAMQVLRDAGDLAKGDQKGRKGGLKGPSNVFKIVKMIMERNFQPVIIFSFS
KKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGIH
HGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTSASKFDGKDFRWISSG
EYIQMSGRAGRRGMDDRGIVILMVDEKMSPAIGKQLLKGSADPLNSAFHLTYNMVLNLLR
VEEINPEYMLEKSFYQFQHYRTIPEIVERVNNLEGQYNKIAIPNEENVVIYYKIRQQLAK
LGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYV
VEVLLHCSKESLKNCATEAAKPARPNEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDN
RQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKDQGLKKVIQKVEAFEHRMYSHPLHNDPNL
ETVYKLCEKKAQIAMDIKTAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIELKGR
VACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQM
QECAKRIARVSAEAKLEIDEENYLNSFRPNLMDVVYTWSNGANFAHICKMTDVFEGSIIR
CMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgtaaaggtgcaagctgtggaaactgttgaaggttgtacacacgaggttgca
cttccagcagatgaagacttcacaggtctgaagccaagaactggaaaagctgcgaaagaa
tatccattcattcttgatgcctttcagagagaagctattctttgtgtagataataaccaa
tctgtgctagtgtcggctcatacatcagctggtaaaactgtttgtgcagaatatgcaata
gcccttgctttgagggagaaacagcgtgtgatatttacaagtccaattaaagctttgagt
aatcagaagtaccgtgaaatgtatgaagaatttcaggatgttggtttgatgactggggat
gtcaccattaatcctacagcttcttgtctggtaatgacaactgagattttgagaagtatg
ctctacagaggttctgaggttatgcgagaagttgcgtgggttatttttgatgaaatccac
tacatgagagattcagaacgtggtgtggtttgggaagagacaattattttgctccctgac
aatgttcattatgtgttcctttctgcaactattccaaatgcccgtcagtttgctgaatgg
atctgccatcttcacaaacagccttgccatgtgatttatactgactatcgacccactcca
ctgcagcattatatattcccagcaggaggagatggactccatctggttgttgatgagaat
ggagatttcagagaagataattttaatacagcaatgcaggtgcttagagatgcaggagac
ttggcaaaaggggaccagaaaggcaggaaaggaggactgaaaggtccttcaaatgttttt
aagattgtaaaaatgatcatggaaaggaatttccaacctgtgattattttcagcttcagt
aagaaagactgtgaagcctatgcacttcagatgacaaagttagatttcaatacagatgaa
gaaaaaaagatggttgaagaagtgttcaataatgcaattgattgtctgtcagatgaagac
aaaaagcttcctcaggttgagcatgtacttcctcttttgaagcgaggaattggtatccat
catggcggtctgcttcctatcctaaaagaaaccatagaaattcttttctctgagggccta
ataaaggccttatttgcaacagagacttttgctatgggaattaatatgccagccaggact
gtgctatttacaagtgccagcaaatttgatggaaaagatttccgatggatatcctcaggt
gaatacattcaaatgtcaggtcgtgcaggacgtcgaggtatggatgacagaggaatagta
attcttatggtggatgaaaaaatgagtccagcaattggcaagcagctcttgaagggttca
gctgatcctttaaacagtgcgttccacctgacgtacaacatggtattgaacttgcttcga
gtagaggagattaatcccgaatacatgttagaaaaatccttctatcagttccaacattac
agaactattccagaaatagtagaaagagtgaataatttggaaggacagtacaacaaaata
gcaattcccaatgaagaaaatgtggtcatatactacaaaatccgacagcagcttgcaaaa
ctgggtaaagagattgaagaatatattcacaaaccaaagtactgtttgccctttctacag
ccagggagactggtaaaggtgaagaacgaaggtgatgactttggatggggagtggtggtt
aatttctccaaaaaatcaaatgttaagccaaattctggtgaattggacccactatatgta
gttgaagtgctactgcactgcagcaaagagagtttgaagaattgtgctactgaggctgca
aagccagccagacctaatgagaaaggagagatgcaggttgttcctgttttggtacatctt
ctctcagctatcagcagtgtccgactttacataccgaaagacctgaggcctgttgacaac
aggcaaagtgtgttaaaatctatacaagaagtacagaagcgatttcctgatggagtacca
ttgctagaccctatcgatgacatgggcatcaaagatcagggactgaaaaaagtaatccaa
aaagtagaggcatttgagcataggatgtattcccatcctcttcacaatgatcccaacttg
gaaactgtatacaaactttgtgaaaaaaaggcacagattgctatggatattaaaacagca
aagcgagaactgaaaaaagccagaactgtcttacaaatggatgaactcaaatgccgcaag
cgtgttttgagaaggctggggtttgccacttcttcagatgttattgagttgaaaggacgg
gtggcttgtgaaatcagcagtgctgatgaacttctcctgacagaaatgatgttcaatggt
ctcttcaatgacttatctgcagaacaggcaactgcactactaagctgctttgtgtttcaa
gagaactccagcgaaatgccaaaattgacagagcagttggcaggaccacttcggcaaatg
caggagtgtgcaaaaagaattgccagggtgtcagcagaagcaaaactggaaattgatgaa
gaaaattacttaaattcgttcagacccaacttaatggatgttgtgtatacatggtcaaat
ggagctaactttgctcacatctgcaaaatgactgatgtctttgaaggtagcataattcgt
tgcatgaggaggctagaagaattgcttcggcagatgtgccaggctgcaaaagccattgga
aacacagagttggaaaataagtttgcagaggggattacaaaaatcaagagagacattgtg
tttgctgcaagcctttacctgtaa
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