KEGG   Athene cunicularia (burrowing owl): 113490292
Entry
113490292         CDS       T05777                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
acun  Athene cunicularia (burrowing owl)
Brite
KEGG Orthology (KO) [BR:acun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acun03041]
    113490292 (SMU1)
Spliceosome [BR:acun03041]
 Complex B
  Other components
   Complex B specific factors
    113490292 (SMU1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st EIF3I ANAPC4_WD40 Beta-prop_EML WD40_Gbeta Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_TEP1_C Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 LisH_TPL Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_IP5PC_F DUF7165 Beta-prop_RSE1_2nd TFIIIC_delta VPS8_N Beta-prop_NOL10_N PROPPIN
Other DBs
NCBI-GeneID: 113490292
NCBI-ProteinID: XP_026722440
UniProt: A0A663N668
LinkDB
Position
Z
AA seq 499 aa
MQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLI
DLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPD
GSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVK
DVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKY
QAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLS
FSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVK
VWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRS
FSSGKREGGDFVCSALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHP
HQNLIATYSEDGLLKLWKP
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgcagtacctgaaggagaatagcctccaccgagcccttgccacccttcaggaagaaact
actgtgtccctcaacactgtggacagcattgagagctttgtggctgacatcaacagcggg
cactgggacacagtgttgcaagccatacagtcgctgaagctgcccgacaagaccctcatt
gatctttacgagcaggttgtgctggagttgattgagctccgggaactaggtgctgccagg
tctctcctgagacaaacagatcccatgatcatgctaaaacaaactcagccagagcggtac
atccacctcgaaaaccttctggccaggtcttactttgatcctcgtgaggcatacccagat
ggaagtagcaaagagaagcggagagctgccattgcacaagctttagctggagaagtcagc
gtggtacctccatctcgtcttatggcgttgttgggacaggcactgaaatggcagcagcat
cagggactgcttcctcctggtatgacaattgacttgttcagaggcaaagcagctgtgaaa
gatgtagaagaagaaaagtttcccacacagctgagcagacatattaagtttgggcagaag
tcgcatgtagagtgtgctcggttttctccagatggacagtatctggttactggctctgtt
gatggttttattgaagtatggaacttcactactggaaagatcaggaaggatctgaaatac
caggcacaagataattttatgatgatggatgatgcagtgctgtgcatgtgcttcagcaga
gatacagaaatgctagcaactggagcacaagatggaaagatcaaggtgtggaagatccag
agtggtcagtgtctgagaagatttgaacgagcacacagtaaaggtgttacatgcctcagt
ttctctaaagacagcagccaaattcttagtgcttcttttgatcagacaatcaggattcat
ggtttaaaatccgggaaaactttaaaggaattccgtggtcattcttccttcgtcaatgaa
gctacttttacccaggatggacactatattatcagtgcatcctctgatggcacagtgaag
gtttggaatgtgaagacgacagagtgctcaaacaccttcaagtctcttggcagtactgct
gggacagacattactgtgaacagtgtcattctgctgcctaaaaacccagaacacttcgtt
gtctgcaacagatcgaatacagttgtcattatgaatatgcaaggacaaattgtaaggagt
ttcagctctggtaagagagaaggtggtgactttgtctgctctgcactatcacctcgtggt
gaatggatctactgtgttggtgaagattttgtgctctattgctttagcacagtgactggc
aaactggagagaactctgactgttcatgaaaaggatgtcattggcattgctcatcacccc
catcagaacctgattgccacttacagtgaagatggtctcctcaagctctggaagccatag

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