Athene cunicularia (burrowing owl): 113491142
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Entry
113491142 CDS
T05777
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03013
Nucleocytoplasmic transport
acun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113491142 (UPF2)
03015 mRNA surveillance pathway
113491142 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113491142 (UPF2)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113491142 (UPF2)
mRNA cycle factors
P-body specific factors
113491142 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
113491142
NCBI-ProteinID:
XP_026723667
UniProt:
A0A663M074
LinkDB
All DBs
Position
1
AA seq
1271 aa
AA seq
DB search
MPAERKKSANMEEKESPLNNKEKEFSERRPVSTREKPKEDVKVGVKRETLKVPEDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTSNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HSHVSVVMSFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLVDLKAFVPAI
LFKDNEKFYQNKDSGKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQVQDLEREFLIKLGIMYDKDSKD
TITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQIKKGAPVGGGDGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagtcagcaaacatggaagaaaaagaatctccattaaataat
aaagaaaaagaatttagtgaaagacgacctgtgagcaccagggagaagccaaaagaggat
gttaaggttggcgtgaagagagagactttaaaggttcctgaagataaaaagaaaaaactg
gaagaggataaaagaaaaaaggaagacaaggagcggaagaaaaaagaagaggataaagta
aaggcagaagaagagcaaaagaagaaagaagaagaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaagaagaagcagctgctcagctg
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggagcgtcatcaggcaagg
aaggagcttcgcagcaaaaaccagaatgcaccagacaatcgccctgaggaaaacttcttc
agcagactggattccagtctgaagaagaacacagcttttgttaagaagctaaaaaccatt
acagagcaacaaagggactccttgtctcatgactttaatagcctgaatttaagcaaatac
atcgcagaagcagtagcttctattgtggaagccaaactgaaaatatcagatgtgaactgc
gccgtgcacttgtgttccctctttcaccagcggtatgctgattttgctccttcgttactt
caggcttggaaaaaacattttgaagcaaggaaagaagagaagacttccaacattaccaag
ttaagaactgatctgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaatcc
cacagtcatgtttctgtggttatgagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaaggaaagtaaaaactgttgcagagaaatttaacttgagctttcctcctagt
gagataattagcccagagaagcaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctccaaaatattgaaagacaaaac
aggcgcattcttcactccaaaggagagctgagtgaagatcgacacaagcaatatgaggaa
tttgcaatgtcgtatcagaagctgttggcaaattctcaatctctagctgatcttttggat
gaaaatatgcctgaccttccccaagagaaaccaacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagaatatgacctggagggaggtatctgggaagat
gaagatgctagaaacttctatgagaatcttgtcgatttaaaggcttttgtgccagcaatt
ttgtttaaagataacgaaaaattttaccagaacaaggattctgggaaggatgaatcaaga
gattcaaaagatgccaaagataataaggaagcacctgggagtgaggatttggagttggag
ctggagaacctggatattaatgatgaccccctggagttggactgtggagatgaggcagaa
gatcttacaaaaaagcttcttgatgagcaagaacaagaggatgaagaagccagtactgga
tctcatttaaaacttatagtagatgcttttcttcagcaacttccaaattgtgtcaacaga
gacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaacaga
agaaaactagtacgagcacttttcatagttcctagacaaaggttggatttgctacccttt
tatgcaagactggttgccacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaaaggggatttcagatttcatgtaagaaagaaggaccagatcaacattgaa
acaaagaataaaactgtgagatttattggtgagcttaccaagttcaagatgttctccaaa
aatgatactctccactgtttaaagatgcttctgtcagacttttctcatcaccatattgaa
atggcatgcactctgctggaaacctgtggaagattcctctttagatcaccagaatctcac
ttaagaaccagtgttcttctggaacaaatgatgaggaaaaaacaagcaatgcatcttgat
gcacgctatgttacaatggtagaaaatgcctattactactgtaatccccctccagctgaa
aaaactgtgaagaaaaaacgtcctcctctgcaggaatatattcgtaagcttctttacaag
gatctttccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttggcag
gatgcagaagtaaaagactatgttatatgctgtatgatcaacatctggaatgtgaaatat
aatagtattcactgtgtagccaacctcttagcaggtttggtcctttaccaggaagatgtc
ggaattcatgttgtggatggagtgctagaggatattcgactaggaatggaggttaaccag
ccaaaatttaaccaacggcggatcagcagtgccaagtttttgggggagctttacaattat
cggatggtggaatcagctgtaatatttcggactctgtattctttcacatcattcggtgtg
aaccctgatggtagtcctagtccactggatcccccagagcatctcttcagaatcagacta
gtttgtactatccttgatacctgtgggcagtattttgacagaggatccagcaaacgaaaa
cttgattgcttccttgtatattttcagcgttatgtttggtggaaaaaaagtcttgatgtt
tggacaaaagaccacccatttcctatagacatagactatatgatcagtgatacactggaa
ctgctgagaccaaagataaagctctgcaattctctggaagaagctatcagacaggttcaa
gatttggaacgagaattcttaataaaactaggaattatgtatgacaaagattccaaagat
accattacagaaggagagaatctagaagaggatgaagaggaggaggaaggtggagcagag
acagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggctcg
gacaatgaggaagaagaaggtgaagaggaggaagaagaaaacacagattatcttacagac
tccaataaggaaaatgaaaccgatgaggagaatacagaagtaatgattaaaggaggggga
cttaagcatgtcccttgtgcagaagatgaagacttcattcaggcactggataaaatgatg
ctggagaatcttcagcaacggagtggtgaatctgttaaagtacatcagttggatgttgct
attcctctacatctcaaaagtcaaatcaagaagggtgccccagttggaggtggggacgga
gagtcagagtctggagacacaatgccatttgtcatgttaacacgcaaaggcaacaaacag
cagtttaagatcctaaatgtaccaatgtcttcccaacttgctgcaaaccattggaaccaa
cagcaagctgaacaggaggagaggatgaggatgaaaaagctcactttggatatcaatgaa
cggcaagaacaagaggactaccaggaaatgttgcagtctctggcacagcgtccagctcca
gcaaatactaatcgtgaacgacggcctcgttaccagcatccgaagggagcacctaatgca
gatctaatctttaaaactggtgggaggagacgttga
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integrated database retrieval system
