Alicyclobacillus curvatus: JZ785_00665
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Entry
JZ785_00665 CDS
T08166
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acur
Alicyclobacillus curvatus
Pathway
acur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JZ785_00665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acur03019
]
JZ785_00665
03009 Ribosome biogenesis [BR:
acur03009
]
JZ785_00665
Enzymes [BR:
acur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JZ785_00665
Messenger RNA biogenesis [BR:
acur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JZ785_00665
Ribosome biogenesis [BR:
acur03009
]
Prokaryotic type
rRNA helicases
JZ785_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
VpsR
Motif
Other DBs
NCBI-ProteinID:
QSO52509
LinkDB
All DBs
Position
complement(142542..143951)
Genome browser
AA seq
469 aa
AA seq
DB search
MALFMELNLSDEVLDSLEEMGFESATAIQLEAIPIALSGQDLIGQAQTGTGKTVAFSIPV
VEAVDTTQHNVQALILTPTRELCIQVAEEIAKVGAKKGVRVLAVYGGHEIQRQIRALKNQ
PSVIVATPGRLMDHMNRRTVNMQHVGMVVLDEADEMLDMGFIEDIEIILAACPPQRQTLL
FSATIKPGVQKLAKKFMRDFTVVSIKAQDMMVPTIEQAYYEVQESHKLDVLTRLLDIQNP
ELAIVFGRTRRRVDELSNALQTRGYLAEGLHGDLNQRQRDSVMSKFRDGSLEVLVATDVA
ARGIDISGVTHVYNFDIPQDVDSYVHRIGRTGRAGKTGIASTFVTPREIEHLRQIERATK
RQIERRPAPTVIEAKYSKQKVAMERLLNNSNSDNLGGFRGLAEELLEQRDSISLVAAAIQ
LLTVNTTEVPIELTAEQPIRVKKPTYRDNKGDRHRKSLRPNGGGRGARR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtttatggaactaaatttgagtgacgaggtactagattctttagaggaaatg
ggtttcgaatccgccacagccatccaattggaagctatacccattgcactttctggtcag
gatttaattggtcaggcgcaaaccggaaccgggaagaccgtggcattttcaattcctgta
gttgaggcagtcgatacgactcagcacaatgtccaagccctcatcctcactcccacccga
gaactctgcattcaggtggcggaagagatcgcgaaggtgggagccaagaagggtgtacga
gtactcgctgtctatggcgggcatgagattcaacgccaaattcgggcgctgaaaaatcag
ccgagcgtaatcgttgctacgccaggacgattaatggaccacatgaatcgacgcacggtt
aacatgcagcatgtcggtatggttgtgttggatgaagccgatgaaatgctggatatggga
ttcattgaggatatcgagatcattttggccgcctgcccaccgcagcgacagacattgttg
ttctcagctaccatcaagccgggtgtgcaaaaactggccaagaaattcatgcgtgacttc
acggtcgtgtcgataaaggcacaggacatgatggttccaaccatcgaacaggcttactat
gaagtgcaagaaagccacaaactcgatgtgttaacgagactattggacattcaaaatccg
gaacttgccatcgtcttcggtcggaccagacgtcgagtcgatgagctttcaaatgcatta
cagacgcgtggttatttagcagagggattgcacggcgacttgaatcagagacaacgagac
agtgttatgagcaaattccgcgacggaagtctcgaggtcttagtggcgaccgacgttgcg
gcaagaggcatcgacatatctggagtgacacatgtctacaactttgacatcccgcaagat
gtagatagttacgttcaccggatcggtagaacaggacgcgcaggaaaaactggcatcgca
tccacgtttgttacgcctcgtgaaatcgaacacctgcgtcaaattgagcgcgccacgaaa
cgtcaaattgagcgtcgtcccgctcctaccgtgatcgaggcaaaatacagtaaacaaaaa
gttgccatggaacgattgttgaacaatagcaattcggacaatctagggggcttccgtggc
cttgctgaggaactgcttgagcaacgggactcgatatcgctggtagctgctgcgattcag
ttgttgacagtgaatacgacagaagtgcccattgaactgactgcggagcagcctattcgc
gtcaaaaagccgacgtaccgagataacaaaggtgaccgtcaccgaaaatctcttcgtccc
aacgggggaggacgcggcgctcgacggtaa
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