Alicyclobacillus curvatus: JZ785_01575
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Entry
JZ785_01575 CDS
T08166
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
acur
Alicyclobacillus curvatus
Pathway
acur02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acur00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JZ785_01575 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acur03021
]
JZ785_01575 (rpoD)
Transcription machinery [BR:
acur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JZ785_01575 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_20
AP3D1
Motif
Other DBs
NCBI-ProteinID:
QSO52657
LinkDB
All DBs
Position
350443..351570
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AA seq
375 aa
AA seq
DB search
MKDVTEEAREDRGLTLQDDKAALTTLGKKRGSLTYTEIVKRLAKHDLDPDQLDEFFDQLS
ELGIDILNERDEDSDSENDEEGPADDERIDLNDLSMPPGVKISDPVRMYLKEIGRVPLLS
AAEEIELAKRIEDGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVE
KFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRISRQLLQELGRE
PTAEEIAAEMDLSAEKVREIQKIAQEPVSLETPIGEEDDSHLGDFIPDDEALAPADAAAY
ELLKEQLEDVLDTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtaacggaagaggcccgcgaggaccgtggacttacccttcaggatgacaaa
gccgcattaacaacgctgggtaaaaagcgtggctcattgacatacacagagatagtcaag
cgcctcgctaaacatgacctcgatccggaccaacttgacgagtttttcgatcaactgtcg
gaacttggcattgatattttgaatgaacgcgatgaggattcagacagtgagaacgatgaa
gaagggccagcggacgatgagcgcatcgacttgaatgacctgagcatgccgcccggtgtc
aaaattagtgatcccgttcgcatgtatcttaaggaaatcggccgtgtgccgctgttgtca
gccgctgaggagattgaattggcgaagcgcatcgaagacggggacgaagaagccaaacgt
cgccttgccgaagccaatttgcgactagtcgtgagtatcgcgaagcgctatgtcgggcgc
ggaatgctgtttctcgacctgattcaggagggaaatctcggtctgattaaggccgttgaa
aagttcgactaccgcaagggatacaagttcagtacgtatgcaacctggtggattcgacaa
gccatcacgagggcgattgctgaccaagcaagaaccattcggattccggttcatatggtg
gaaaccatcaataaactcatccggatttcccggcaactactgcaggaactcgggcgtgaa
ccaaccgcagaagaaattgcagcggagatggaccttagtgcagaaaaggtgcgggagatt
caaaaaatcgcacaagagcctgtatcgctcgaaacgccaattggcgaagaagatgattct
catctcggagactttatcccggatgacgaggcactcgcacctgcggacgccgcggcgtat
gagttgctcaaagagcaactcgaagacgtccttgataccttgacagagcgtgaagagaac
gtgttgcgactgcggtttgggcttgatgacggacggacgcgcacacttgaagaagtgggg
aaggtgttcggtgttacacgtgaacgcattcgccaaattgaagcaaaggcactacgcaaa
ctgcgtcacccaagccgcagtaagcgtttgaaagatttcctcgagtaa
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integrated database retrieval system
