Alicyclobacillus curvatus: JZ785_07845
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Entry
JZ785_07845 CDS
T08166
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acur
Alicyclobacillus curvatus
Pathway
acur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JZ785_07845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acur03019
]
JZ785_07845
03009 Ribosome biogenesis [BR:
acur03009
]
JZ785_07845
Enzymes [BR:
acur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JZ785_07845
Messenger RNA biogenesis [BR:
acur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JZ785_07845
Ribosome biogenesis [BR:
acur03009
]
Prokaryotic type
rRNA helicases
JZ785_07845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
SBF_like
Motif
Other DBs
NCBI-ProteinID:
QSO54976
LinkDB
All DBs
Position
complement(1582344..1583924)
Genome browser
AA seq
526 aa
AA seq
DB search
MGSFQDFALSKRVQQAIDGMGFEEPSPIQAACIPLVLTGRDVIGQAQTGTGKTAAFGVPM
IEQVSAEGRVEGLVLTPTRELAIQVAGEFRKIGKFKRVRTLPIYGGQSIGHQIRSLQQGV
QIVVGTPGRVLDHIRRGTLRFDNLKTVVLDEADEMLDMGFIEDIETILKETPSSRQTMLF
SATFTPEIKRLAVRYMKDPEHVTVNRGEITVPLTEQVYYKVLERNKLESLCRVIDSEEVE
LGIIFCRTKRGVDELVEALVARGYLVDGLHGDLSQAQRDRVMRKFRNNEIELLVATDVAA
RGIDVDNVTHVINHDIPQDPESYVHRIGRTGRAGKRGLAITLVTPREFKLLKQIERETKT
TMSSREVPTLADVAERQAEIWRNRIVETIQSGGLGHYRALLGNMVDEYDPVDIACAALKL
SSAGELQTEEGQDYDFGETGGGPGMVRFFVNIGRGAHIGPADLVRAISEEAGVPGQVVGK
IDIFDRFTFVEIEEDAAPFVYEAMRKGRINGARINMEPARPRARTR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatttcaggattttgcacttagcaagcgggtacagcaagcgattgacggaatg
ggttttgaagaaccatctccgattcaggcagcgtgtatcccactcgttcttactgggcga
gatgtgattggccaggcccagacagggaccgggaaaacggcagctttcggcgtgccgatg
attgaacaggtgtccgcagaaggacgcgtcgaaggattggtgctgacgccgacacgtgag
ttggcgattcaggtggcaggagagtttcgcaagattggtaagttcaagcgcgtacgtacg
ctgccgatttatggtgggcaatcgattggtcatcagattcgttcactgcaacagggcgtg
caaattgtcgttggaacacccggacgggtacttgaccacattcgtcgcggcacactgcgg
tttgacaacctcaagaccgttgttctcgatgaagcggatgagatgcttgatatgggcttt
atcgaagacattgaaacgattctcaaggagaccccgtcaagccggcagacgatgctgttc
tcggcaacgttcactcctgagattaagcgccttgctgttcgttacatgaaggatccggaa
catgtcacagtaaaccgcggagaaattacggttccgctcacggaacaggtttactataag
gtcctcgagcgcaataaactcgagagtttgtgccgggtcatcgacagcgaagaggtggaa
cttggcatcattttctgccggaccaaacgcggcgtcgacgaactggtggaagctcttgtc
gcccgtggctaccttgtcgatggacttcatggtgatttgagtcaggcgcaacgcgacagg
gttatgcgtaagttccgcaacaatgaaatcgagttgctcgtcgcaacagacgtggctgcc
cgcggcatcgacgttgataacgtcacgcacgtgataaaccacgacattccacaggatccg
gagtcgtacgtgcaccgcatcggccgaacgggtcgtgcaggcaagcggggtctcgccatc
acgctggttacgccgcgtgagtttaaactgctcaagcaaattgagcgtgagacgaagacc
actatgagttcccgtgaagtgccgacgttggcggatgttgcggagcgtcaggctgaaatt
tggcgcaaccgtatcgtggagacgattcaaagcggtgggctcgggcactaccgtgcactg
cttggcaacatggttgacgagtacgatccggtggatatcgcttgtgcagcactgaagctg
tcttcagcgggcgaattgcagactgaggagggtcaagattacgactttggcgaaaccggt
ggcggccctggcatggttcgtttcttcgtgaacatcggccgtggtgcacacattggtcca
gcagacttggtccgcgccatttctgaagaagcaggtgtgccgggtcaggtggtcggaaag
atcgacatcttcgaccgcttcacgtttgtggagattgaggaagacgcagcgccgttcgtg
tatgaggcaatgcgcaagggtcgcatcaatggcgcccgcatcaacatggaacctgcccgt
ccgcgcgctcgcacgcgctga
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