Alicyclobacillus curvatus: JZ785_13820
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Entry
JZ785_13820 CDS
T08166
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acur
Alicyclobacillus curvatus
Pathway
acur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JZ785_13820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acur03019
]
JZ785_13820
03009 Ribosome biogenesis [BR:
acur03009
]
JZ785_13820
Enzymes [BR:
acur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JZ785_13820
Messenger RNA biogenesis [BR:
acur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JZ785_13820
Ribosome biogenesis [BR:
acur03009
]
Prokaryotic type
rRNA helicases
JZ785_13820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Helicase_RecD
RHSP
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QSO54715
LinkDB
All DBs
Position
complement(2875082..2876536)
Genome browser
AA seq
484 aa
AA seq
DB search
MSKESFKDYQLSEDIVRSLDSLGYEHPTDVQSEVIPIALGKKDLVVKSRTGSGKTAAFGI
PICELVEWVENKPQALILTPTRELAVQVKEDITNIGRLKRIKATAVYGKQPFARQQAELK
QKSHVVVGTPGRVLDHIERGTLDLQRLTYLVIDEADEMLNMGFIKQVEAIIRELPKDRVT
MLFSATLPEDIRDLSKRYMNNPVDIEIKIEENAAMTVQTEHALFIVKEEDKFNLLTNVTV
VENPDSCIIFCRTQEHVENIFRNLSRLSYPCDKIHGGMEQDERFNVMNKFKRGEFRYLVA
TDVAARGIDVENITHVINYDLPLEKESYVHRTGRTGRVGKTGKAITFVTPYEEKFLSDIE
GFIGFEISKPDFPSKEEVTSMRAAFEEKLLARPTIKRNKDEHLNHNILKLYFNGGKKKKI
RAVDFVGTIAKIEGVTVEDIGIITIQDNLSYVDILNGKGPLVLNAMKSTTIKGKLLKVHR
ATEQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggaaagtttcaaagactatcagttaagtgaggacatcgtccgctcgttggat
agtttgggctatgaacatcccacggacgttcaaagtgaagtgataccgattgccttgggg
aaaaaagaccttgttgtaaaatcccgaacaggaagtggcaaaacggctgcattcggaatt
ccgatttgtgaactggtggagtgggtagagaataaacctcaagcgctcatattaaccccc
acacgcgagctcgcagtacaagtgaaagaggatatcactaatatcgggagacttaagcga
attaaagcgacagctgtttatgggaagcaaccttttgctagacaacaggccgaattaaag
caaaaaagccatgttgttgtgggcacaccgggacgtgttctcgatcatattgaaagaggg
acattggacctgcaacgactaacatatcttgtgattgatgaagctgatgagatgttgaac
atgggatttatcaaacaagtagaagctattatccgtgagttgcccaaggaccgagtaacc
atgttattttccgctacgttgccagaggacattagagatttatctaagagatacatgaac
aatccagttgacatagagatcaagattgaagagaatgcagcaatgacagtgcaaaccgag
catgctctgtttatcgttaaagaagaagataaattcaaccttcttacgaatgtaacagtc
gttgagaatccggatagttgtattattttttgtcgaacccaagaacatgtggaaaacata
tttagaaatttaagtcgcctttcttatccctgtgacaaaattcatggaggtatggaacag
gacgaacgatttaatgtcatgaacaagtttaaaagaggggaatttcggtatctggttgcg
acggacgtcgctgcgagaggaattgatgttgaaaatatcacacatgtgattaactatgac
cttcctttagagaaggaaagctatgtgcaccgcaccggtagaacgggacgggtcggcaag
accggaaaagcaattacctttgttacaccgtatgaagaaaaattcttatcagatattgaa
ggcttcattgggttcgaaatctctaagccagattttccctccaaagaagaagtgacatca
atgagagcggcttttgaagaaaaactactggctcgaccaaccattaaaaggaataaggat
gagcatctaaaccacaacatcttgaagttatattttaatggtggcaagaaaaagaaaatc
agagccgtagattttgtgggtaccattgctaaaatcgaaggcgtaacagtagaagatatt
gggattattacgatacaggacaatctttcatatgttgatatattgaatggtaaagggcca
ctcgtgctcaatgccatgaaaagcacgaccattaaagggaagctattaaaggttcaccgt
gcaacagagcagtaa
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