Alicyclobacillus curvatus: JZ785_13900
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Entry
JZ785_13900 CDS
T08166
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
acur
Alicyclobacillus curvatus
Pathway
acur02020
Two-component system
acur02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acur00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JZ785_13900 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JZ785_13900 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acur03021
]
JZ785_13900 (rpoN)
Transcription machinery [BR:
acur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JZ785_13900 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_27
MarR
HTH_IclR
HTH_Crp_2
HTH_23
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QSO54729
LinkDB
All DBs
Position
complement(2893461..2894981)
Genome browser
AA seq
506 aa
AA seq
DB search
MLLKCKTETVYRTWRSLGNRSATAGRPLGYRSVPARRPLGDDAYRPHLMTERVNTVDLAF
HMTQEQTQKLVMTTQMREALSVLEMSSEDLHQYVTERAEQNVFLGTLRKRDRHRKNGRVS
APSASGMYSPRNGPPIENMLVADWTLIDDIKQQLLFLDCTAEERAWALRLAEDLDENGYL
GPFSPELMARLNLNETQWQAAVACIQRCDPVGVGARNLQECLLLQLNSDSVSVQSDIRPL
AGAIIHLHLEDVASGRIVQVARRLKVTADEVRMGLDAIRRLNPRPGSGYGSVSVNYTRPD
LSVVETELGFAVVVTDTLLDMSFRHQSYQEMMRDTDADMDVRRYLSEQWREARWIRRCVV
QRQMTLQRIGEAIVQLQPEFLLHGLEHLRPMRLRDIADVLEIHESTVSRAIRHKSVATPV
GTIELRQLFSSTLHADSGDVSAAAIKHQIRDFIRSESRDDPLTDAAIADKLQESGVKVSR
RTVAKYREAMGIPGSMTRRMQAPMGG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgctgttaaaatgtaagacagaaacggtataccgtacctggcgctcgctcggcaaccgc
tcggcaaccgctgggcgaccgcttggctaccgctcggtgcccgctcggcgaccgctcggt
gacgatgcatatcggccgcacctcatgacggaaagggtgaacactgtggatctggccttt
cacatgacacaagaacaaacccaaaaattggtcatgacgacacagatgcgggaagcctta
tccgtgctggagatgtcgagtgaggacctccatcaatacgtgactgagcgcgcagaacag
aatgtgtttttggggaccttgcgaaagcgagatcggcatcgcaaaaacgggcgcgtatct
gctccttccgcttccggaatgtacagtcctcgaaatgggccgccgattgaaaacatgctg
gttgcagactggacgctgattgatgatatcaagcaacaactgttgttcctcgactgcacg
gctgaggaacgggcatgggcgctgcgtttagctgaggaccttgatgaaaacggttacctg
ggcccgtttagtccggaactgatggcgcggctgaatttgaatgagacccagtggcaggcg
gctgtggcgtgtattcaacggtgcgatcccgttggcgtcggcgcccgcaacctccaagaa
tgcctgttgctgcagttgaacagcgacagtgtcagtgtgcaaagcgacatccgtccctta
gcgggcgccattattcatctccatctcgaagatgttgccagtgggcgcattgtacaggtg
gcgagacgtctgaaagtcacagcggacgaggtccgcatgggcctggatgccattcggcga
ttgaatcctcggccgggttcgggatacggatcggtctcagtcaactatacccgcccggat
ttaagtgttgtcgaaacggagctcgggtttgcggtcgtcgtcacagacacacttttagac
atgtctttcaggcaccagtcgtatcaggagatgatgcgcgacaccgatgcggatatggat
gttcggcgctatctctccgaacagtggcgcgaagcgcgttggatccgccgctgtgtggtg
caacggcagatgacgttgcagcggatcggcgaggccattgttcaactgcagccggagttt
cttctgcatgggctggaacacctgcggccgatgcggctgcgggacatcgcggatgtgctg
gagatccacgagtcgactgtcagcagggccatccgtcataagagtgtcgcgacaccggta
ggcaccatcgagctccggcagctgttttcctcgacgttgcacgctgacagcggtgacgtc
tcggcggcagccatcaaacaccaaattcgcgattttatccgctcggagtcgcgcgacgat
ccgttgaccgatgcagccatcgcggataagctgcaggagagcggggtcaaagtcagccgc
cgcaccgtcgcgaagtatcgtgaggcgatggggataccgggatcgatgacgcggcgcatg
caggcgcccatgggcgggtag
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