Alicyclobacillus curvatus: JZ785_16705
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Entry
JZ785_16705 CDS
T08166
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acur
Alicyclobacillus curvatus
Pathway
acur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JZ785_16705 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acur03021
]
JZ785_16705 (rpoC)
03400 DNA repair and recombination proteins [BR:
acur03400
]
JZ785_16705 (rpoC)
Enzymes [BR:
acur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JZ785_16705 (rpoC)
Transcription machinery [BR:
acur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JZ785_16705 (rpoC)
DNA repair and recombination proteins [BR:
acur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JZ785_16705 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QSO50560
LinkDB
All DBs
Position
complement(3501435..3505067)
Genome browser
AA seq
1210 aa
AA seq
DB search
MLDVNNFEFMKIGLASPEKIRSWSHGEVKKPETINYRTLRPEKDGLFCERIFGPQRDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGDTPLEKKQLLSEKEYRSYREKYGYAFEAGMGAESIKKLLL
DINLDKEVDQLKDELRTAQGQRRNRVIKRLEVLEAFRASGNEPSWMILEALPVIPPDLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIYQCGLPKE
MALELFKPFVMKELVARGLAHNIKSAKRKVERVSPEVWDVVEDVIREHPVLLNRAPTLHR
LGIQAFEPILVEGRAIKLHPMVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAHNIL
NPKDGKPVVTPTQDMVLGPYYLTIERPGAVGEGRVFADPDEVNVALQRKEIELHTRIVIP
AKSLGKTSFSKEQEQAFLLTTPGKLIFNEVFPADFPYLHSGAKQNLYEGAPAETFIFEKG
VNLRERALSRKSPKPIIKKDLGNILAECFDRYGTTQTAEILDRVKKLGFHYSCQAGITIS
VADIIVPEEKMIIIDEADSKDHKLVQQYRRGLITEEEKYMSFSQIWSEAKEKLSETLMQS
MDELNPIYMMATSGARGSQSQITQLAGMRGLMANPSGQIIQLPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDTIVREIDCGTDKGLRVAEIRDGREIIEEI
YDRLEGRIAFQDVYHPGTGAKLVGKNELIDAITATAIVDAGIQEVYIRSVLTCRTRHGVC
VHCYGRNLATGKLVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQAVITEFDGVITDARETKDKREIEVTGESETKVYAIPYGSRIRVSVNQKISA
GDELTEGSVDPKEMLRVKGLAGVQNYLLREVQRVYRLQGVDINDKHVEVMVRQMLRKVRI
LDSGDTDLLPGTYADLYDYEMANREVLFRGKEPAVARPALLGITKASLETDSFLSAASFQ
ETTRVLTEAAIKGKVDKLLGLKENVIIGKLIPAGTGMSRYRHIEIVSDDDPVEVSEEATA
SSEAEVSVSE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
ttgttggatgtgaacaactttgagtttatgaagatcggactggcctcgccagaaaagatc
cgctcctggtcacatggtgaagtcaagaagccggagaccatcaactaccgcaccctccgc
cctgagaaggatggactgttctgcgaacggatcttcggaccgcagcgcgactgggaatgt
cattgcggcaaatacaagcgggttcgttataagggtgtcgtgtgtgaccgttgcggcgtt
gaagtaacacgttccaaggtgcgccgtgagcgtatgggtcacattgagcttgcagctcca
gtctcgcacatctggtacttcaagggtattccgagccgtatgggacttgtgctcgacatg
tctcctcgcgcccttgaggaagtcatttacttcgcatcatacgttgtcaccgatcctggg
gatacgccgcttgagaaaaagcagctcctgagcgagaaggaataccgctcataccgggaa
aagtacggttacgcttttgaggcggggatgggcgcggagtcgattaagaaattgctcctc
gacatcaaccttgacaaagaagtcgaccagttgaaggacgaattgcgcacagctcagggg
caacggcgtaatcgcgtgattaagcgccttgaagttctggaagcattccgcgcgtctggc
aacgaaccgagttggatgattcttgaggccttgcctgtcatccccccagacctgcgtcca
atggtgcaactcgatggcggccgctttgcgacctctgacttgaatgacttgtaccgtcgc
gtcattaaccgcaacaatcgcctgaagcgattgctcgacctgggtgcacctgacattatc
gtccagaatgaaaagcggatgctgcaggaagctgtcgacgcactgattgacaacggacgt
cgcggacgccccgttacagggcccggtaaccggccgctgaaatccctgtcgcacatgctg
aagggtaagcagggtcgtttccgtcagaatctgcttggtaagcgtgttgactactcaggt
cgatccgttatcgtcgtcggtccggaactgaagatctatcagtgtggtctgccgaaggaa
atggcactggagttgttcaaaccgtttgtcatgaaagagctggtggctcgcggtttggcg
cacaacatcaagagtgcgaagcgtaaagttgagcgggtttcgccggaggtctgggacgtc
gttgaggacgtcatcagggagcaccctgtgctgttaaaccgtgcaccgacgctgcatagg
ttaggtatccaggcattcgagcccattctggttgaaggccgcgcgattaagctgcacccg
atggtttgtaccgcgtataacgccgactttgacggtgaccagatggcggtacacgtgcca
ctgtccgctgaggcgcaagctgaggctcgacttctaatgttagctgcacataacatcttg
aacccgaaagatggaaaacctgtcgtgacgccgacgcaggacatggtgcttggaccgtac
tacttgactatcgagcgtccgggtgcagttggcgaaggccgtgtctttgctgaccctgat
gaagtcaatgtagcgttgcagcgcaaagaaattgaacttcacacgcggatcgtgattcct
gcgaagtcgctgggcaaaacgtctttcagtaaagaacaagagcaagcatttttgctcaca
acaccaggcaagctgatttttaatgaggtctttccggctgacttcccgtatttgcattcg
ggggcaaagcaaaacctctacgagggtgcacctgccgagacgtttatctttgaaaagggc
gtcaatcttcgtgaacgggcgctaagtcggaagagtccgaagcccatcatcaagaaagac
cttgggaacattctggcggagtgtttcgatcgctatggaacgacgcagacagccgagatt
ctggaccgcgtgaaaaaactcggtttccactactcctgtcaggctggcatcaccatctcg
gtggcggatatcatcgttccggaagagaaaatgattattattgacgaggcggatagcaag
gatcacaaactcgttcagcagtatcgtcgtggtttgattaccgaggaagagaaatacatg
tcgttcagccagatctggagcgaagcgaaagagaagctctcggaaactttgatgcagagt
atggatgagttaaatccaatttacatgatggccacgtccggggcccgcggcagccagtcg
cagattacacagttggctggtatgcgcggcttgatggcgaacccatccggacaaatcatc
caactgccaatcaagtcgaatttccgtgaaggtctgacggtgttggagtactttatttcc
actcacggcgccagaaagggtcttgctgacacggcgcttcgtacagctgactcaggatac
ctgactcgtcgtttggttgacgtggctcaagataccatcgtccgcgaaatcgactgtggc
accgacaagggacttcgcgtcgcggaaatccgtgatggtcgcgagatcatcgaagaaatc
tacgatcgccttgaagggcgcatagccttccaggatgtttatcatcctggaaccggtgcg
aagctcgttggtaaaaatgaattgattgatgcgataacggcgacagccattgttgacgcg
ggtatccaggaagtttatattcgctcagtgctgacatgtcgcacacgtcatggagtctgt
gtgcactgctatgggcgtaacctggcgaccggtaagcttgtggagattggtgaagccgtc
ggcattatcgcggcgcagtccatcggcgaacctggaacgcagttgaccatgcgtactttc
catactggcggcgttgctggtgatgacatcacgcaaggtttgccgcgtattcaggaattg
ttcgaggcccgtaatccgaagggtcaagcggtcatcaccgagtttgatggtgtcatcacg
gacgcccgtgaaacaaaggataagcgcgagattgaagtcacgggtgagagtgagaccaag
gtatacgcaatcccatacggatctcgaattcgtgtctctgtgaatcagaagatttccgct
ggtgatgagttgacggaaggatccgttgacccgaaagagatgctgcgcgtcaagggcttg
gcaggcgtacagaactacctgttgcgcgaagtgcaacgcgtgtatcgacttcaaggcgtg
gatatcaacgacaagcacgttgaagtcatggtacgtcagatgttgcgcaaggtacgtatt
ctggactccggagacacggatctcctgccgggaacctatgcagacctatacgattatgaa
atggcaaaccgcgaggtgcttttccggggcaaagagccagcagtcgcgaggccagccctt
ctcggcatcaccaaggcatcccttgagactgactccttcttgtcagcggcgtctttccag
gagaccaccagggtgttgacggaagcggccatcaagggcaaagtcgacaaattgcttggg
ctcaaggagaacgtcattatcgggaaactgattccggccggcacaggtatgtcgaggtat
cgccatattgaaatcgtgagtgatgacgaccccgtggaagtgtcggaagaagccaccgca
tcttcagaagctgaggtatcagtgtctgagtaa
DBGET
integrated database retrieval system
