Alicyclobacillus curvatus: JZ785_19620
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Entry
JZ785_19620 CDS
T08166
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
acur
Alicyclobacillus curvatus
Pathway
acur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JZ785_19620 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acur03021
]
JZ785_19620 (rho)
03019 Messenger RNA biogenesis [BR:
acur03019
]
JZ785_19620 (rho)
Transcription machinery [BR:
acur03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JZ785_19620 (rho)
Messenger RNA biogenesis [BR:
acur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JZ785_19620 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA
ATPase_2
S1CSD-TOTE-2
AAA_22
SAP_new25
NACHT
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QSO51050
LinkDB
All DBs
Position
4181893..4183149
Genome browser
AA seq
418 aa
AA seq
DB search
MDIKELESKKLTELYQFAKEYQIPYYGNMKKRELIFAILRAQAEKDGLMFAEGVLEIMQD
GFGFLRPVGYLPSAEDIYVAASQIRRFDLRTGDVVSGKVRPPKDNERYFGLLHVEAINGV
SPQEAMERLHFPALTPLFPEVHMVTETTPERVATRLMDLFAPIGFGQRGLIVAPPKAGKT
MLLKEIAHSISANYPEATLIVLLIDERPEEVTDMQRSVKGEVIASTFDEVPENHIKVAEL
VLEHALRLVEHKRDVIILLDSITRLARAYNLVVPPSGRTLSGGIDPAAFHRPKRFFGAAR
KVEEGGSLTILATALIETGSRMDDVIYEEFKGTGNLELHLDRKLAEKRVFPSLDIRRSGT
RREEMLLPKAVLEKVWAIRKSMGDNQDFTELFIRKFKHYKTNEEFLAGLELQHKEKKA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttggacattaaagaactagaatcaaagaaactgaccgagttgtatcaatttgcaaaggaa
taccaaattccctactacgggaacatgaagaaacgtgaacttatattcgcaatcttgagg
gcccaggcggagaaagacggattgatgttcgccgagggtgtcctcgaaatcatgcaggac
ggtttcggattcctcagacccgtcgggtacctccccagcgcagaagacatctatgttgca
gcttcacaaatccgacgctttgacctccgaactggtgacgttgtttccggaaaggttcga
cccccaaaggacaacgaacgatactttggtctcctgcacgtagaagccattaacggtgta
agtccgcaagaagcaatggaacgtctgcatttccccgcgctcacacctttgtttcctgaa
gtgcacatggtgacagagacaactccagaacgggtcgcgacaaggctgatggacctcttc
gccccgataggatttggacagcgcggattgattgtggcaccgcctaaggcaggtaaaacc
atgctgctgaaggaaatcgcccacagtatttccgccaattatcctgaagccactttaatt
gttctcctgattgacgaacgcccagaagaagtgacggatatgcagagaagcgtcaagggt
gaagtgattgcctcgacctttgacgaagttccggagaatcacatcaaggttgctgaactg
gtccttgagcacgctttacgtttggtcgagcataaacgtgacgtcatcattctgcttgac
agtatcacgcgtttggcccgggcctacaacctcgttgtgccgccgagtggacggacactt
tcagggggtatcgatcccgctgccttccaccgccccaaacgcttcttcggtgcagcccgc
aaggttgaagagggtggcagtttgaccatcttggcgaccgcgcttatcgaaaccggatcg
cgcatggatgacgtcatttacgaagaattcaagggaaccggtaacctcgaactccatctc
gacaggaaactcgccgagaagcgtgtattcccgtctctggacattcgccgatccggtacc
cgccgcgaagaaatgctccttccgaaggcggtgctcgagaaggtttgggcgattcgcaag
tcgatgggagacaatcaggactttacggagttgttcatccgcaagttcaagcattacaag
accaacgaagaattcctcgctggactcgaactgcaacataaagagaaaaaggcttaa
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