Acuticoccus sp. I52.16.1: MRB58_00820
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Entry
MRB58_00820 CDS
T08076
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acut
Acuticoccus sp. I52.16.1
Pathway
acut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRB58_00820 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acut03019
]
MRB58_00820 (pnp)
03016 Transfer RNA biogenesis [BR:
acut03016
]
MRB58_00820 (pnp)
Enzymes [BR:
acut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MRB58_00820 (pnp)
Messenger RNA biogenesis [BR:
acut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MRB58_00820 (pnp)
Transfer RNA biogenesis [BR:
acut03016
]
Prokaryotic type
tRNA degradation factors
MRB58_00820 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
aRib
SCAF11-like_C
Motif
Other DBs
NCBI-ProteinID:
UOM34791
LinkDB
All DBs
Position
complement(182109..184229)
Genome browser
AA seq
706 aa
AA seq
DB search
MFDVQKETIEWGGRTLTLETGKVARQADGAVLATYGETTVLATVVSEQQPKAGFDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPSEHETLTSRLIDRPIRPLFVEGYKNDTQVIITTLAH
DLETQPDILAMVAASAALTLSGVPFMGPIGGARVGYIDGEYVLNPTLDQMEDSALDLIVA
GTDEAVLMVESEAKELSEEIMLGAVMFGHTEFQPVIDAIIRLAEKAAKEPRDFQPADYSD
LAAKVTSFAKADLVKAYAIKEKTERRAAIDEVKARVMAEFVTEAEGAPTKQQAGEVFKKV
EASIVRGQILDAGTRIDGRDLKTVRPIVAEVGILPRAHGSALFTRGETQALVVATLGTGD
DEQFVDLLEGTRKESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAQHD
FPYTKRVVSEITESNGSSSMATVCGTSLALMDAGVPLSAPVAGIAMGLIKEGDKFAVLSD
ILGDEDHLGDMDFKVAGSMNGVTSLQMDIKIDGITEEIMKVALEQAKDGRVHILGEMGKA
IGEARAELGEYAPRIEVINIPVDKIREVIGSGGKVIREIVEKTGAKVDISDDGTVKIASA
DGKAIKAALNWIRGITAEPEVGHIYEGTVVKVVDFGAFVNFFGPRDGLVHISQMTNGRPE
KSSDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGEEIPKEAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgtccagaaagagaccatcgagtggggcggccgcacgctgaccctcgagacc
ggcaaggtcgcccgtcaggccgacggcgccgtcctcgccacctacggcgagaccaccgtg
ctcgccaccgtcgtctccgagcagcagcccaaggccggcttcgacttcttcccgctgacc
gtgaactaccaggagaaggcgttcgcggccggtaagatccccggcggcttcttcaagcgt
gagggccgtccgtccgagcacgagaccctgacctcgcgcctgatcgaccgtccgatccgc
ccgctgttcgtggaaggctacaagaacgacacccaggtcatcatcacgaccctggcgcac
gaccttgagacccagcccgacattctcgccatggtcgcagcttcggctgccctgacgctg
tcgggcgtgccgttcatgggccccatcggtggcgcccgcgtcggctacattgacggtgag
tacgtcctcaacccgaccctcgaccagatggaagacagcgcgctcgacctcatcgtcgcg
ggcacggacgaggcggtcctgatggtcgagtcggaggccaaggagctctccgaggagatc
atgctcggcgccgtgatgttcggccacaccgagttccagccggtgatcgacgcgatcatc
cgcctcgccgagaaggccgccaaggagccgcgcgacttccagccggccgactattccgac
ctcgccgccaaagtcacctccttcgccaaggcggacctggtgaaggcctacgccatcaag
gagaagaccgagcgccgcgccgcgatcgacgaggtcaaggcccgcgtgatggccgagttc
gtcaccgaggccgagggcgcgccgaccaagcagcaggccggcgaggtcttcaagaaggtc
gaggcgtcgatcgtccgcggccagatcctggacgccggcacccgcatcgacggccgcgac
ctgaagacggtgcgtccgatcgtggccgaggtcggcatcctgccgcgcgcgcacggctcg
gcgctcttcacccgcggcgagacgcaggccctcgtggtcgccaccctcggcaccggcgac
gacgagcagttcgtcgacctgctggaggggacgcgcaaagagagcttcatgctccactac
aacttcccgccctactcggtgggcgagaccggccgcatgggctcgcccggccgccgcgag
atcggccacggcaagctcgcctggcgcgcgatccatccgatgctgcccgcccagcacgac
ttcccctacaccaagcgcgtcgtgtccgagatcaccgagtccaacggctcgtcgtcgatg
gcgacggtctgcggcacctcgctggcgctgatggatgcgggcgtgccgctgtcggccccg
gtcgcgggcatcgccatgggcctcatcaaggaaggcgacaagttcgccgtcctgtccgac
attctcggcgatgaggaccacctcggcgacatggacttcaaggtcgccggctcgatgaac
ggtgtcacgtcgctgcagatggacatcaagatcgacggcatcaccgaggagatcatgaag
gtcgccctcgagcaggccaaggacggccgcgtgcatatcctgggcgagatgggcaaggcc
atcggcgaggcgcgcgcggagctgggcgagtacgccccccgcatcgaggtcatcaacatc
ccggtcgacaagatccgcgaagtcatcggctcgggcggcaaggtgatccgcgagatcgtc
gagaagaccggcgccaaggtcgacatctccgacgacggcaccgtcaagatcgcctccgcc
gacggcaaggccatcaaggccgcgctcaactggatccgtggcatcaccgccgagccggaa
gtgggccacatctacgagggcacggtcgtcaaggtcgtcgacttcggcgccttcgtgaac
ttcttcggcccgcgcgacggcctggtccacatctcccagatgaccaacggtcgcccggag
aagtcgtccgacgtcgtcaaggaaggccagaaggtctgggtcaagctcatgggcttcgac
gagcgcggcaaggtccgcctgtccatgaaggtggtcgaccaggagaccggcgaagagatc
ccgaaggaagccgcggagtaa
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