Acuticoccus sp. I52.16.1: MRB58_04265
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Entry
MRB58_04265 CDS
T08076
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acut
Acuticoccus sp. I52.16.1
Brite
KEGG Orthology (KO) [BR:
acut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acut03032
]
MRB58_04265 (topA)
03400 DNA repair and recombination proteins [BR:
acut03400
]
MRB58_04265 (topA)
Enzymes [BR:
acut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MRB58_04265 (topA)
DNA replication proteins [BR:
acut03032
]
Prokaryotic type
DNA Topoisomerases
MRB58_04265 (topA)
DNA repair and recombination proteins [BR:
acut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MRB58_04265 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
KARI_N
Toprim_4
DUF5437
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
UOM35429
LinkDB
All DBs
Position
complement(953685..956498)
Genome browser
AA seq
937 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSDYHVVASYGHVRDLPPKDGSVDPDNDFFMLWQVDAKAAK
RLNDLAKAVKDADRLILATDPDREGEAISWHVLQVLKDKKALKSQTVQRVVFNAITKQAV
LDAMAAPRDIEEHLVDAYRARRALDYLVGFNLSPVLWRKLPGSRSAGRVQSVALRLVCDR
EAEIERFVAQEYWSVITTLANPAGDTFDARVAVLDGKRVDRLAIKSEADATAIVDHLKVA
DFDAVSVEAKPQKRNPAPPFTTSTLQQEASRKLGFSSARTMQVAQKLYEGIDLGGETVGL
ITYMRTDGVQMAPEGISAIRRLVGKDYAETYLPEKPRYYATKAKNAQEAHEAIRPTDPFR
RPAQMKRYLGDDEFRLYDLVWKRAMASQMQSAEFERTTVDIDAKAGGKTIGLRATGSVML
FDGFLSVYMEGRDDDSDDDDGGRLPKIAQGDALRREAVKPAQHFTEPPPRYTEATLIKKM
EELGIGRPSTYTATLSTLRDREYVELDKKRLVPGSKGRMVTAFLESFFERYVEYGFTADL
EEKLDAISDGRLDWRQVLREFWADFSKQIGEVLEVRTAAVLDALNEDLAPLIYPPRPDGS
DPRICPVCGSGNLSLKTSRYGAFIGCSNYPECNYTREFGDDPNADPKPTGPQVLGVHPDT
GKEIHLKTGRFGPYIELASDEGEKPPRSSLPKGWAPEEITLEKAIALLSLPRDVGQHPET
QEPIQAGLGRYGPYLLYGGKYSKLESIDDVFEIGLNRAVAMIAERKEGKGFGRTPAALKT
LGAHPSGGEVTVREGRYGPYVNHGKVNATLPKGTDPQAVTLEEALKLIEERAGKAPKAKA
KTASKAKTATKTTKAKAGTKTSAAKAKTTKAKADDALVEDDAEPAKPKATAKKAPAKSAA
AKATPAKKNVGTKAAAAKSTGGAAKSSGKDDTPPWEE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgttgtcgtcgagtctccggccaaggcgaagactatcaacaagtacctgggg
tccgactaccacgtggtcgcgtcctacggtcacgtgcgcgatctgccgccgaaggacggg
tcggtcgaccccgacaacgacttcttcatgctgtggcaggtcgacgcgaaagccgccaag
cgcctcaacgacctcgccaaggccgtaaaggacgccgaccgcctgatcctcgcgaccgac
ccggatcgcgagggcgaggcgatctcctggcacgtcctgcaggtgctaaaggacaagaag
gcgctcaagtcgcagacggtgcagcgggtggtgttcaacgccatcaccaagcaggccgtg
ctcgacgcgatggccgccccgcgcgacatcgaggagcacctcgtcgacgcctaccgtgct
cgccgcgcgctggactatctcgtcggcttcaacctgtcgccggtcctgtggcgcaagctg
ccgggctcgcggtcggcgggccgcgtgcagtccgtggcgctgcgcctggtgtgcgaccgc
gaggccgagatcgagcggttcgtcgcccaggaatattggtccgttatcacgacgctcgcc
aacccggcgggcgacaccttcgacgcccgcgtcgccgtgctcgacggcaagcgggtcgat
cgcctcgccatcaagagcgaggccgacgcgacggcgatcgtcgaccacctcaaggtggcg
gacttcgacgccgtctcggtcgaggccaagccgcagaagcgcaatccggccccgccgttc
accacgtcgaccctgcagcaggaggcgagccgcaagctcggcttctcttcggcgcgcacc
atgcaggtggcgcagaagctctacgagggcatcgacctcggcggtgagacggtgggtctc
atcacctacatgcgaaccgacggcgtgcagatggcgcccgaggggatcagcgcgatccgc
cgcctcgtcggcaaggactacgccgagacctacctgcccgagaagccgcgctattacgcc
accaaggcgaagaacgcgcaggaggcccacgaggcaatccgcccgaccgacccgttccgc
cgccccgcgcagatgaagcgctatctcggcgacgacgagttccgtctttatgatctcgtc
tggaagcgcgcgatggcgagccagatgcagtcggccgagttcgagcgcaccacggtcgac
atcgacgccaaggccggcggcaagacgatcggcctgcgcgcaacgggctcggtcatgctg
ttcgacggcttcctgtcggtctacatggagggccgggacgacgactcggacgacgacgac
ggcggccgcctgccgaagatcgctcagggcgacgcgctccgccgcgaggcggtaaagccg
gcacagcacttcaccgagccgccgccccgctacaccgaggcgacgctcatcaagaagatg
gaggagctgggcatcggccgcccctccacctacaccgccaccctgtccaccctgcgcgac
cgcgagtacgtcgaactcgacaagaagcggctcgtgcccggatccaaggggcggatggtc
acggccttcctggagagcttcttcgagcgctacgtcgagtacggcttcaccgccgacctc
gaggagaagctcgacgcgatctccgacggccggctcgactggcgccaggtgctgcgcgag
ttctgggcggacttctccaagcagatcggcgaggtgctggaagtgcgcaccgcggcggtg
ctcgacgcgctgaacgaggacctcgccccgctcatctacccgccgcggccggacggttcg
gacccgcgcatctgcccggtgtgcggctcgggcaacctgtcgctgaagacctcgcgctac
ggcgccttcatcggctgctccaactacccggagtgcaactacacccgcgagttcggcgac
gatccgaatgccgacccgaagccgaccggcccgcaggttctgggcgtccatccggacacc
ggcaaggaaatccacctcaagaccggccgcttcgggccctacatcgagttggcgagcgac
gagggcgagaagccgccgcgctcctcgctgccgaaggggtgggcgccggaggagatcacg
ctggagaaggcgatcgcgctgctgtcgttgccgcgtgacgtcggccagcatccggagacg
caggagccgatccaggccggcctcgggcgctatgggccctacctcctctacggcggcaaa
tactccaagctcgaatcgatcgacgacgtgttcgagatcggcctcaaccgggccgtcgcg
atgatcgccgagcgcaaggagggcaagggcttcggccgcacgcccgccgcgctgaagacg
ctcggcgcccacccttcgggcggtgaggtcaccgtgcgcgagggccgctacgggccgtac
gtcaaccacggcaaggtcaatgcgacgctgccgaaggggaccgacccgcaggccgttacc
ctcgaagaggcgctgaagctgatcgaggagcgggccggcaaggcgccgaaggccaaagcg
aagacggcctccaaggcgaagacggcgaccaagacgacgaaggcgaaggccgggaccaag
acgagcgccgccaaggcgaagacgaccaaggcgaaagccgacgacgcgctcgtggaggac
gacgccgagccggccaagccgaaggccacggcgaagaaggcccccgcgaagtcggccgcc
gcgaaggcgacgcccgcgaagaagaacgtcgggacgaaggccgcggccgccaagtccacc
ggcggtgcggccaagagcagcggcaaggacgacacgccgccctgggaagagtag
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